Methanosarcina acetivorans: MA_3527
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Entry
MA_3527 CDS
T00080
Symbol
cdc48
Name
(GenBank) cell division control protein 48 AAA family protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mac
Methanosarcina acetivorans
Pathway
mac04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MA_3527 (cdc48)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mac03019
]
MA_3527 (cdc48)
03009 Ribosome biogenesis [BR:
mac03009
]
MA_3527 (cdc48)
04131 Membrane trafficking [BR:
mac04131
]
MA_3527 (cdc48)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mac04147
]
MA_3527 (cdc48)
Messenger RNA biogenesis [BR:
mac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MA_3527 (cdc48)
Ribosome biogenesis [BR:
mac03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MA_3527 (cdc48)
Membrane trafficking [BR:
mac04131
]
SNARE
SNARE associated proteins
Others
MA_3527 (cdc48)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MA_3527 (cdc48)
Exosome [BR:
mac04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MA_3527 (cdc48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_5
AAA_16
AAA_22
TIP49
AAA_2
AAA_14
IstB_IS21
AAA_25
AAA_33
AAA_28
AAA_7
nSTAND3
RNA_helicase
Mg_chelatase
AAA_18
Sigma54_activat
Parvo_NS1
ATPase
NPHP3_N
AAA_17
AAA_24
DUF5906
Zeta_toxin
ABC_tran
SLFN-g3_helicase
PhoH
AAA_19
bpMoxR
NB-ARC
TsaE
DUF815
Vps4_C
ATPase_2
ResIII
Rad17
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-ProteinID:
AAM06890
UniProt:
Q8TK87
LinkDB
All DBs
Position
4362400..4364760
Genome browser
AA seq
786 aa
AA seq
DB search
MEEIQLKVEKAYPIDLGRGIIRLDPAALLKLQLSPGDIVEIRGKKKTTAKVWRADRQDWE
QGIVRIDNFIRQNAGVSIGEKVTIKKVEAPEAKKLILALPESMTQGGPELQFGEHANEII
KRHILKRPVFKGDIIPIINSMSQPMTESLTTSQVIPLVAVETDPANTIVLITEATIIELR
KKPVQGYEKATRGVTTYEDIGGLGQEIMRVREIIEMPMKHPELFAHLNIEPPKGVILYGP
PGTGKTLIAKAVANESGASFHYIAGPEIVGKFYGESEERLRKIFEEATQDAPSVIFIDEI
DSIAPKRENVTGEVERRVVAQLLTLLDGMEERGQVVVIGATNRVDAIDPALRRPGRFDRE
IHIGVPDTKDRYEILQIHTRGMPIEKDDEITPAESEVELEEATEIEAEIEVDEAALEREK
KEKTNRYLMYLAEKTQGFVGADLLALVQEAAMRCLRENLPDLDLEKETIPPERLEKIVVT
KKNFEDALMEAEPSALREIFVEMPSVGWDGVGGLDEAKNAIIEAVEWPIKNPEKFVKLGI
KAPKGILLYGPPGTGKTLIAQAVAKESNANFISVKGPEMFSKWLGESEKAIRETFKKARQ
VAPCVVFFDEIDSIAAMQGMESTDSRTSERVLNQLLTEMDGLETLKDVVIIAATNRPNLL
DPAIMRPGRFDRLVYVGAPDRKGRMKIFKIHTRNTPLAEDVDLENLANITEGYVGADIEA
VCREAVMFALRENFDVEAIEMRHFREALKKVKPTINENIAQFYEKIEEQFKGGQRPAETA
GYVGYR
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatacagttgaaggttgaaaaggcataccctatcgaccttggaagaggaatt
atccggcttgaccctgcagcgctactgaaacttcagctctctcccggcgacattgtagag
attagggggaagaaaaagaccacagcaaaggtatggagagcagaccggcaggattgggaa
cagggaatagtgcgaattgataattttatccggcagaatgccggagtttccatcggggag
aaggtgaccattaaaaaggtcgaagccccggaagcaaaaaagctcattctggcgcttccg
gaaagcatgactcagggagggcccgaactgcagtttggagagcatgcgaatgagatcata
aagcggcacatcctgaaaagacctgttttcaagggggacataattccgattattaattcg
atgtctcagccaatgactgagtccctgacaacaagccaggtaatcccgctggttgctgtt
gagacggacccggcaaacaccattgtccttatcacggaagccacaattattgagctccgg
aaaaagccggtacagggctacgaaaaagcgaccagaggcgtcactacctacgaagacatc
ggagggcttggccaggagatcatgcgtgtccgggaaataatagagatgccgatgaaacac
ccggagctctttgcccacctcaatatagagcctccgaaaggagttatcctctacggccca
cccggaaccggaaagacccttatcgcaaaagccgtggcaaatgaatccggggcaagcttc
cattacattgcagggcccgaaatcgttggaaagttctacggggaaagcgaggaaaggctg
aggaagatcttcgaagaagcaacccaggacgccccttcggttattttcattgacgaaata
gactccattgcccccaaaagggaaaacgtaacaggagaagttgaaaggcgtgttgttgcc
cagctcctgacccttcttgacgggatggaggaaagggggcaggtcgtggttataggagct
accaaccgtgtggatgcaatcgaccccgcactcaggagaccggggcgttttgacagggaa
atccatatcggagtgccggataccaaagacaggtacgagattctgcagatccacacccgg
ggcatgccaatcgagaaagatgacgaaatcacaccagcagagtccgaagtcgaacttgaa
gaagcaactgaaatcgaagctgaaatagaagtcgatgaagctgccctggagagagaaaaa
aaagagaagacaaaccgctatctcatgtatctggctgagaagacgcagggctttgtaggg
gcagaccttctggctctcgtgcaggaagccgcaatgcgctgcctcagggaaaacctgcct
gaccttgacctcgaaaaggaaacaattcctcccgaacggctggaaaagattgttgtaacc
aagaagaacttcgaagatgctttgatggaagccgaaccctcagccctgagggagatcttt
gttgagatgccttcggttggctgggacggcgtgggaggcctggatgaagcgaagaatgcg
atcatcgaagccgtcgagtggcctattaaaaacccggaaaaatttgtcaaactgggcata
aaagctccgaagggaatcttgctttacggcccaccggggacgggaaagaccctgatagcc
caggctgtagccaaagagtcaaacgccaatttcataagcgtcaaagggccggagatgttt
tcgaagtggctcggggagtcggaaaaagcaatcagggaaaccttcaagaaagcaaggcag
gttgctccctgtgttgtcttctttgatgagattgactccattgctgccatgcagggcatg
gaatctacggacagccggacttcggaaagggtgctcaaccagctgctgaccgaaatggac
gggcttgagaccctcaaggacgtggtaattattgccgcaacaaaccgtcctaacctgctt
gaccccgcaatcatgcgcccgggccgttttgacaggctggtttacgttggtgcacctgac
cgtaaaggcaggatgaagatctttaagatccacacaaggaataccccgcttgcggaggac
gtagatcttgaaaaccttgccaatataactgaaggatacgtgggtgctgacatagaagca
gtatgcagagaggctgtaatgtttgccctcagagagaacttcgatgttgaagcaattgag
atgaggcacttcagagaagccctcaagaaagtaaaacccacaattaacgaaaacattgca
cagttctatgagaagatagaggagcagtttaagggaggccagagaccagcagagacagct
gggtatgtaggatacaggtaa
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