Methanosarcina acetivorans: MA_3624
Help
Entry
MA_3624 CDS
T00080
Symbol
endA
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mac
Methanosarcina acetivorans
Brite
KEGG Orthology (KO) [BR:
mac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mac03016
]
MA_3624 (endA)
Enzymes [BR:
mac01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MA_3624 (endA)
Transfer RNA biogenesis [BR:
mac03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MA_3624 (endA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AAM06979
UniProt:
Q8TGX1
LinkDB
All DBs
Position
complement(4468439..4469491)
Genome browser
AA seq
350 aa
AA seq
DB search
MKTQLEGDRVLAGKEAVAELYKTGYFGRPREDGLELSLVEAAYLQFRGKIEIELEGRKLD
FRALFEQASLRQPNFELKYIVYKDLKERGYYVQPSAADFRVYPRGSHPGKSAAKIFVHVL
SERQPLPVKLLQDSVISAENVHKQFILAVVDEESDLTFYEIKTASPQGEMPEPYPEVKTD
ATFLEDRVIAWDAEASGALYAGGFYGKMLDPERLQLSLVESLYLFSRGIIVVRDRKDRIF
SFDEFVEKASEIESSFLRKYGAYKALRDSGHVVKTGFKFGTHFRVYRKVESIEKIPHSEY
LVNVIPSDYEFRLPVMSGAVRLANSVRKRMLFAVEKEEGVEYLDISRVKM
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacacaacttgaaggagaccgggtccttgccggaaaggaagcggttgccgaactt
tacaaaacaggttatttcgggcgtcccagggaggacgggcttgaactctcgctcgtggag
gccgcatacctccagttcagaggaaaaatcgaaatagagcttgaagggagaaagcttgat
ttcagggctcttttcgagcaggcttctctgaggcagccgaacttcgagctgaagtatatc
gtttataaagaccttaaagagcggggatattatgtccagccttcggctgcggatttcagg
gtctatcccagaggcagccatcccggaaaaagtgcggcaaaaatctttgtccatgtcctg
tccgaaaggcagccccttcctgtaaagctcttgcaggactcggtcatctcggcagaaaat
gtgcataaacagtttatcctggctgtggtggacgaagaaagcgacctgaccttctacgag
attaaaaccgcttcccctcagggggagatgcctgagccctaccctgaagtcaaaaccgat
gcgactttcctcgaagaccgggtaatagcctgggatgccgaggcttcaggggctctttac
gccgggggtttctacgggaaaatgcttgaccctgaaaggttgcagctctcccttgttgag
tccctctacctcttttcgagagggataatagttgtcagggacaggaaagacaggatcttc
tcgttcgatgaatttgttgagaaagcctcggaaatcgagagttctttcctgcgtaaatac
ggtgcatataaagctctgcgagactcagggcatgtggtcaagaccggctttaagttcggg
acccatttcagggtctacaggaaagtcgagtccatagaaaaaattccccattccgagtat
cttgtaaacgtaattccttctgattacgagttcaggcttccggtcatgtccggggctgtc
aggcttgcaaacagcgtgcgcaaaagaatgctttttgcagtcgagaaagaggaaggagtc
gagtacctggacattagcagagtcaaaatgtaa
DBGET
integrated database retrieval system
