Methanosarcina acetivorans: MA_3871
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Entry
MA_3871 CDS
T00080
Symbol
tfe
Name
(GenBank) archaeal transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mac
Methanosarcina acetivorans
Pathway
mac03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MA_3871 (tfe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mac03021
]
MA_3871 (tfe)
Transcription machinery [BR:
mac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
MA_3871 (tfe)
Prokaryotic type
Archaeal type
TFE
MA_3871 (tfe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HVO_2753_ZBP
RepL
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AAM07222
UniProt:
Q8TJB7
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All DBs
Position
4756146..4756649
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AA seq
167 aa
AA seq
DB search
MNTLVDLNDKVIRGYLISLVGEEGLRMIEEMPEGEVTDEEIAAKTGVLLNTVRRTLFILY
ENKFAICRRERDSNSGWLTYLWHLDFSDVEHQLMREKKKLLRNLKTRLEFEENNVFYVCP
QGCVRLLFDEATETEFLCPMCGEDLVYYDNSRFVSALKKRVDALSSV
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
gtgaacactttggtagatttgaatgacaaggtaattagaggatatctcattagccttgta
ggggaagaagggcttagaatgatagaagagatgcccgaaggcgaagtcacggatgaagaa
attgcggcaaagaccggagttctgttaaataccgtgagaagaaccctcttcatactttac
gaaaacaaatttgcaatctgccgcagagaaagagattcaaacagcggatggttgacttat
ctctggcatctggacttttccgacgtagagcatcagctcatgagggaaaagaaaaagctg
ctcaggaacctgaaaacccgtcttgaatttgaggaaaataacgtgttttatgtctgcccg
cagggctgtgttcgccttctttttgatgaagcaactgaaacggaatttctctgccccatg
tgtggcgaagacctggtctattacgacaattcccgttttgtgagcgccctgaaaaagcgc
gtggacgccctgagttccgtataa
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