Methanosarcina acetivorans: MA_4331
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Entry
MA_4331 CDS
T00080
Symbol
tbp-1
Name
(GenBank) TATA-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mac
Methanosarcina acetivorans
Pathway
mac03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MA_4331 (tbp-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mac03000
]
MA_4331 (tbp-1)
03021 Transcription machinery [BR:
mac03021
]
MA_4331 (tbp-1)
Transcription factors [BR:
mac03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
MA_4331 (tbp-1)
Transcription machinery [BR:
mac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MA_4331 (tbp-1)
RNA polymerase III system
TFIIIB
MA_4331 (tbp-1)
RNA polymerase I system
SL1/TIF-1B
MA_4331 (tbp-1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
RTT107_BRCT_5
Motif
Other DBs
NCBI-ProteinID:
AAM07674
UniProt:
Q8TI26
LinkDB
All DBs
Position
complement(5332823..5333374)
Genome browser
AA seq
183 aa
AA seq
DB search
MSESSIKIENVVASTKLAEEFDLTVIESEFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSG
KVVCTGAKNVADVHTVIGNMAKKLNSIGIKTMENPQITVQNIVASADLHTILNLNAIAIG
LGLENIEYEPEQFPGLVYRIDEPKVVVLIFSSGKLVVTGGKSPEDCERGVEVVRQQLDNM
GLL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatctagcattaaaattgaaaacgtggttgcatccaccaaactcgctgaagag
tttgatttaactgtgattgaatccgagttcgaaggcgccgagtacaacaagcagaagttc
ccggggctcgtctatagagtttcggaccccaaagctgctttcctggtctttacttccgga
aaggttgtctgcacaggagcaaagaatgttgctgacgtacacacagttatcggcaatatg
gcaaaaaagttgaacagtatcgggatcaagacaatggaaaacccgcagattactgtccag
aatatagttgcctcagcagacctgcacaccatccttaacctcaatgcaattgccatcggg
cttgggcttgaaaatatcgaatatgaacccgagcagttcccggggcttgtgtacaggatc
gatgagcccaaggtagttgtccttattttcagttccggaaaactggtagttacaggcgga
aaatcccccgaagactgtgagaggggtgtggaagtagtccgtcagcagcttgataacatg
ggacttttataa
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