KEGG   Methanosarcina acetivorans: MA_4331
Entry
MA_4331           CDS       T00080                                 
Symbol
tbp-1
Name
(GenBank) TATA-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
mac  Methanosarcina acetivorans
Pathway
mac03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MA_4331 (tbp-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mac03000]
    MA_4331 (tbp-1)
   03021 Transcription machinery [BR:mac03021]
    MA_4331 (tbp-1)
Transcription factors [BR:mac03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    MA_4331 (tbp-1)
Transcription machinery [BR:mac03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     MA_4331 (tbp-1)
  RNA polymerase III system
    TFIIIB
     MA_4331 (tbp-1)
  RNA polymerase I system
    SL1/TIF-1B
     MA_4331 (tbp-1)
SSDB
Motif
Pfam: TBP DUF3378 RTT107_BRCT_5
Other DBs
NCBI-ProteinID: AAM07674
UniProt: Q8TI26
LinkDB
Position
complement(5332823..5333374)
AA seq 183 aa
MSESSIKIENVVASTKLAEEFDLTVIESEFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSG
KVVCTGAKNVADVHTVIGNMAKKLNSIGIKTMENPQITVQNIVASADLHTILNLNAIAIG
LGLENIEYEPEQFPGLVYRIDEPKVVVLIFSSGKLVVTGGKSPEDCERGVEVVRQQLDNM
GLL
NT seq 552 nt   +upstreamnt  +downstreamnt
atgagcgaatctagcattaaaattgaaaacgtggttgcatccaccaaactcgctgaagag
tttgatttaactgtgattgaatccgagttcgaaggcgccgagtacaacaagcagaagttc
ccggggctcgtctatagagtttcggaccccaaagctgctttcctggtctttacttccgga
aaggttgtctgcacaggagcaaagaatgttgctgacgtacacacagttatcggcaatatg
gcaaaaaagttgaacagtatcgggatcaagacaatggaaaacccgcagattactgtccag
aatatagttgcctcagcagacctgcacaccatccttaacctcaatgcaattgccatcggg
cttgggcttgaaaatatcgaatatgaacccgagcagttcccggggcttgtgtacaggatc
gatgagcccaaggtagttgtccttattttcagttccggaaaactggtagttacaggcgga
aaatcccccgaagactgtgagaggggtgtggaagtagtccgtcagcagcttgataacatg
ggacttttataa

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