Methanosarcina acetivorans: MA_4575
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Entry
MA_4575 CDS
T00080
Symbol
cdc48
Name
(GenBank) cell division control protein 48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mac
Methanosarcina acetivorans
Pathway
mac04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MA_4575 (cdc48)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mac03019
]
MA_4575 (cdc48)
03009 Ribosome biogenesis [BR:
mac03009
]
MA_4575 (cdc48)
04131 Membrane trafficking [BR:
mac04131
]
MA_4575 (cdc48)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mac04147
]
MA_4575 (cdc48)
Messenger RNA biogenesis [BR:
mac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MA_4575 (cdc48)
Ribosome biogenesis [BR:
mac03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MA_4575 (cdc48)
Membrane trafficking [BR:
mac04131
]
SNARE
SNARE associated proteins
Others
MA_4575 (cdc48)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MA_4575 (cdc48)
Exosome [BR:
mac04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MA_4575 (cdc48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
CDC48_2
RuvB_N
AAA_5
AAA_2
TIP49
AAA_14
AAA_22
AAA_33
nSTAND3
AAA_28
AAA_17
Mg_chelatase
Sigma54_activat
ABC_tran
NPHP3_N
AAA_7
AAA_3
IstB_IS21
RNA_helicase
AAA_18
DUF815
Zeta_toxin
Vps4_C
NACHT
AAA_24
TsaE
ATP-synt_ab
Parvo_NS1
AAA_lid_PRS2_C
AAA_19
NB-ARC
PhoH
bpMoxR
AAA_30
Sigma54_activ_2
DUF5906
AAA_11
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AAM07914
UniProt:
Q8THE2
LinkDB
All DBs
Position
complement(5635412..5637673)
Genome browser
AA seq
753 aa
AA seq
DB search
MTEEMNLRVAEAYHKDVGRGIARIDTRLMQEMGLVSGDIIEISGRSKTYAIVWPNVERGQ
ENRIRIDGNLRSNAKVGIDDRVTIQKVQAKHAQRVTLAPSQPVRLVGGAHYILRIIEGRP
LNKGQQIRVETVNNPLTFVVASTRPAGPVVVTKDTEIVIKEKSIEEIKTPEGISYEDIGG
LRREIQLVREMIELPMRHPELFQKLGIEPPKGVLLHGPPGTGKTMIAKAVASETDANFIT
ISGPEIVSKYYGESEQKLREIFDEAEKDAPSIIFIDEIDSIAPKRGEVTGEMERRVVAQL
LSLMDGLKSRGEVVVIAATNRPNSIDEALRRGGRFDREIEIGIPDRNGRRQILLIHTRGM
PLEDEVSLGEIADVTHGFVGADLSSLCKEAAMHALRRITPEIDIEEEIPQEIIDNLVVTK
EDFREALKNIEPSAMREVYVEVPHVGWDDIGGLDKAKQELIESVEWPLKYPEMFKAVNIK
PPRGVLLFGPPGTGKTLLAKAVASESEANFISIKGPELLSKYVGESERAIRETFRKAKQA
APTVIFFDEIDSIAPERSSVSDTHVSERVVSQILTELDGVEELKDVIIVAATNRPDMVDP
ALLRPGRFDRLIYIKPPGKEGREKIFEIHTKGKPLAEDVKLSELAEMTEGYVGADIEGIC
REAAMLALREIVTPGTDRKSIKEKAGDVRLSKRHFERAIRRVRPTTSRETLSAYEKSAEL
FARYAAELEEESSEAKEEEKEIEGKEVPNFPKV
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagaaatgaatctgagagtagctgaggcttatcataaagatgtgggcagagga
attgcaagaattgatacccgtcttatgcaggaaatgggtcttgtgagcggagatattatt
gaaatctcaggcagatcaaagacttatgcaatagtctggcctaacgtcgagcgcggacag
gagaacaggatcagaatagacggaaacctgcgcagcaatgcaaaagtcggaattgatgac
agagttactatccagaaggttcaggcaaaacatgctcaaagggtcacacttgctccatcc
cagcctgtcagacttgtgggcggagcccattacatcctgaggataattgagggcagacct
ctgaacaaaggtcagcagatcagagttgaaaccgtaaataatcccctgactttcgtagtg
gcatccacaaggcctgcagggccggtcgttgtcaccaaagacactgaaattgttatcaag
gaaaaatcaatcgaagaaatcaagaccccggaagggatttcgtatgaggacatcgggggg
cttagacgggaaatccagctcgtaagggaaatgatcgagttgccaatgagacatcctgaa
ctcttccagaagctgggaatcgagcctcccaaaggggtcctgcttcacgggccgccggga
acgggcaaaaccatgattgcaaaggcagttgcaagtgaaaccgacgccaatttcatcaca
atcagcggccctgaaatcgtttccaaatattacggagaaagtgaacagaagctccgggag
atcttcgacgaagctgagaaggatgcaccttccatcatcttcatagacgaaatcgactcc
attgctcccaaacgcggtgaagttaccggagaaatggaacgaagggtggtagcccagctc
ctctccctgatggacgggcttaagtccaggggtgaagtcgttgtcatagctgccacaaac
cgcccgaactccattgacgaagccctccgccgcggcggaaggtttgacagggaaattgaa
atcggaattcctgaccggaacggcaggagacagattctcctgatccacaccagaggcatg
cctcttgaagatgaagtaagtcttggagaaattgcagatgtaacccacggttttgtggga
gccgatctctcctctctctgtaaggaagctgcaatgcatgccctcagaaggatcacccct
gaaatcgatatcgaagaagagatcccacaggaaatcattgacaacctggtggttacgaag
gaagacttcagagaagccctgaagaatatcgagccttcagccatgcgagaagtctatgtt
gaagttccgcatgtgggctgggacgatatcggcggacttgacaaagcaaaacaggaactt
atcgagtctgttgaatggcctctcaagtatcccgaaatgttcaaggccgtcaatataaag
cctcctagaggtgtcctgctcttcgggcctccgggtacggggaagactttgcttgcaaaa
gctgttgcaagcgagagtgaagccaactttataagtataaaaggccctgaacttctcagt
aaatatgtgggtgaatccgaacgtgcaatcagggagacgttcaggaaagcaaagcaggct
gcaccgactgtaattttctttgatgagatcgactccattgctcctgaaaggagctctgtt
tccgacactcacgtatccgaaagggtggtaagccagatcctgacagaacttgacggtgta
gaggaactcaaggacgtgatcatagttgctgctacaaaccggccggatatggtagaccct
gccctcctcagacccggccgttttgacaggctcatttacataaagccgcccggaaaagaa
ggcagagagaagatctttgagatccacacaaaaggaaaacccctcgcagaggatgtaaaa
ctctccgaactggctgaaatgaccgaagggtatgtgggtgcggatatcgaaggcatctgc
agggaagcggcaatgcttgccctcagggaaatagtcactccaggcactgaccggaagagc
attaaggaaaaggccggagacgttcgcctttcaaaaaggcattttgaaagggcaatccgc
cgtgtaaggcctacaacgtccagagaaacccttagcgcctacgaaaagagtgcagagctc
tttgccaggtatgcagccgagcttgaggaagaatcttccgaagcaaaagaagaagaaaag
gaaatagagggaaaagaagtcccgaattttcctaaggtctaa
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