Marinobacter sp. CA1: J2887_00045
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Entry
J2887_00045 CDS
T10810
Symbol
vsr
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
maca Marinobacter sp. CA1
Brite
KEGG Orthology (KO) [BR:
maca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maca03400
]
J2887_00045 (vsr)
DNA repair and recombination proteins [BR:
maca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
J2887_00045 (vsr)
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF4832
Motif
Other DBs
NCBI-ProteinID:
UDL05221
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Position
complement(9483..9998)
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AA seq
171 aa
AA seq
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MSDIVDQAVRSKMMAKVKSKNTKPELAIRSALHRLGYRFRIHKKELPGCPDLVFPKYHAV
VFVNGCFWHGHSCSLFKWPKSRPDFWRRKITQNRKRDRSNSNKLLATGWRVCTVWECSVK
NRSQADFTLVIDNLVQWLLGSEPVKDISTSEANAPKLTHEHSIQMTPPKND
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgatatcgttgatcaggccgttcgatccaagatgatggcaaaggtaaaaagcaag
aacactaagccggaacttgctatccggtccgccttgcaccgtctcggttacagatttagg
atccacaagaaggaactgcctgggtgtcccgatcttgtttttccaaaatatcatgcagtt
gtgttcgtaaacggctgcttctggcacggccactcttgctctctcttcaagtggccaaaa
agtagacccgacttctggagaaggaagattacccagaacagaaagagagatcgcagcaac
agtaacaaactgctagcaacagggtggcgtgtctgcaccgtgtgggaatgctcagtaaag
aacagaagccaagcggatttcacgcttgtgattgacaatctagttcagtggcttctggga
tcagaaccagtcaaagatatctctacttccgaagccaatgctccaaagttgacccatgaa
cattccatccaaatgacgccaccaaaaaatgattaa
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