Marinobacter sp. CA1: J2887_00270
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Entry
J2887_00270 CDS
T10810
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
maca Marinobacter sp. CA1
Pathway
maca03030
DNA replication
maca03430
Mismatch repair
maca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J2887_00270
03430 Mismatch repair
J2887_00270
03440 Homologous recombination
J2887_00270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maca03032
]
J2887_00270
03400 DNA repair and recombination proteins [BR:
maca03400
]
J2887_00270
Enzymes [BR:
maca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J2887_00270
DNA replication proteins [BR:
maca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J2887_00270
DNA repair and recombination proteins [BR:
maca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J2887_00270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UDL05263
LinkDB
All DBs
Position
complement(62983..63705)
Genome browser
AA seq
240 aa
AA seq
DB search
MVQRSQQEITDTPWPLRMANAGRMARDPRLQAFYQADWPAAETPIHEVPMVAVDFETTGL
DPDKHSIVSIGLVPFTSQRIQCARSRHWVVRPKLPLRQDSVTIHGITHSDIDNAPDLDDI
LGDVLEALAGRIVVVHYRQIERPFLDVALRWRLQEGITFPVIDTMAIEAHLHPNRTPNWW
KKLLGQQPVSIRLADSRSRYHLPHYAPHHALTDALATAELLQAQLQHHFTPETPIRDLWL
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggttcaacgctcccagcaggaaatcaccgataccccctggccgctgcgcatggccaat
gccggtcgcatggcccgggacccgcgtctgcaggcgttctaccaggccgactggcccgcg
gcggagacgcccatccacgaggtgccgatggtggcggtggatttcgagaccaccggcctc
gatccggacaagcactccatcgtcagcatcggtctggtgccgttcaccagccagcgcatc
cagtgtgcccggtcccgtcactgggtggtgcggcccaagctgccactgcgacaggactcg
gtgaccatccacggcatcacccattccgatatcgacaacgcgccggacctggacgatatt
ctgggggatgtgctggaggcgctggcgggccggattgtggtggtgcactaccgccagatc
gagcggccgttcctggacgttgccctgcgctggcggctgcaggaaggcatcaccttcccg
gtgatcgacaccatggccatcgaggcgcacctgcaccccaatcgcacccccaactggtgg
aaaaaactgctgggccagcaaccggtgtccatccgcctggccgacagtcgcagccgctac
cacctgccccactacgctccccaccacgccctcaccgacgccctggccacggcggagctg
ctgcaggcgcagctacagcaccactttacccccgagacgccgatccgggatttgtggttg
tag
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