KEGG   Marinobacter sp. CA1: J2887_00270
Entry
J2887_00270       CDS       T10810                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
maca  Marinobacter sp. CA1
Pathway
maca03030  DNA replication
maca03430  Mismatch repair
maca03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:maca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    J2887_00270
   03430 Mismatch repair
    J2887_00270
   03440 Homologous recombination
    J2887_00270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:maca03032]
    J2887_00270
   03400 DNA repair and recombination proteins [BR:maca03400]
    J2887_00270
Enzymes [BR:maca01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     J2887_00270
DNA replication proteins [BR:maca03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     J2887_00270
DNA repair and recombination proteins [BR:maca03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     J2887_00270
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: UDL05263
LinkDB
Position
complement(62983..63705)
AA seq 240 aa
MVQRSQQEITDTPWPLRMANAGRMARDPRLQAFYQADWPAAETPIHEVPMVAVDFETTGL
DPDKHSIVSIGLVPFTSQRIQCARSRHWVVRPKLPLRQDSVTIHGITHSDIDNAPDLDDI
LGDVLEALAGRIVVVHYRQIERPFLDVALRWRLQEGITFPVIDTMAIEAHLHPNRTPNWW
KKLLGQQPVSIRLADSRSRYHLPHYAPHHALTDALATAELLQAQLQHHFTPETPIRDLWL
NT seq 723 nt   +upstreamnt  +downstreamnt
atggttcaacgctcccagcaggaaatcaccgataccccctggccgctgcgcatggccaat
gccggtcgcatggcccgggacccgcgtctgcaggcgttctaccaggccgactggcccgcg
gcggagacgcccatccacgaggtgccgatggtggcggtggatttcgagaccaccggcctc
gatccggacaagcactccatcgtcagcatcggtctggtgccgttcaccagccagcgcatc
cagtgtgcccggtcccgtcactgggtggtgcggcccaagctgccactgcgacaggactcg
gtgaccatccacggcatcacccattccgatatcgacaacgcgccggacctggacgatatt
ctgggggatgtgctggaggcgctggcgggccggattgtggtggtgcactaccgccagatc
gagcggccgttcctggacgttgccctgcgctggcggctgcaggaaggcatcaccttcccg
gtgatcgacaccatggccatcgaggcgcacctgcaccccaatcgcacccccaactggtgg
aaaaaactgctgggccagcaaccggtgtccatccgcctggccgacagtcgcagccgctac
cacctgccccactacgctccccaccacgccctcaccgacgccctggccacggcggagctg
ctgcaggcgcagctacagcaccactttacccccgagacgccgatccgggatttgtggttg
tag

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