Marinobacter sp. CA1: J2887_03080
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Entry
J2887_03080 CDS
T10810
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
maca Marinobacter sp. CA1
Brite
KEGG Orthology (KO) [BR:
maca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
maca03016
]
J2887_03080 (truB)
Enzymes [BR:
maca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
J2887_03080 (truB)
Transfer RNA biogenesis [BR:
maca03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J2887_03080 (truB)
Prokaryotic type
J2887_03080 (truB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UDL05766
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All DBs
Position
664251..665171
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AA seq
306 aa
AA seq
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MSRRRKGRDVNGILVIDKPQGITSNGILQQVKRLYGAAKAGHTGALDPLATGVLPLCFGE
ATKFSQLMLDSDKAYITTARLGVRTETGDSEGAVVDERPVPEGLDEDALEPVLANFRGDI
QQVPSMYSALKHKGRPLYEYAREGIEVERPPRPVTIYQLILLNVRANEIDLAVKCTKGTY
IRSLVDDIGEALGCGAHVTALRRTLAAGFTLDQVHRVDDLEAMRERGESLDGLLVKPDAA
LSMFPELTLEGASLVSILNGQPVRISGHSISGPVRLYGDRGFVGLGEGFAEGDGCKIVPR
RLVKHG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcgtcgacgcaaaggccgtgatgttaacggcattctggtgatcgacaagccgcag
gggatcacctccaacggtatcctgcagcaggtcaaacgattgtacggtgccgccaaggcc
ggccataccggtgcgctggacccgctagcgacgggcgtgctgccgctgtgctttggtgag
gccaccaagttttcccagctgatgctggacagtgacaaagcttacatcaccaccgctcgt
ctcggcgttcgtaccgaaaccggcgacagcgaaggggcggtggtcgatgagcgtccggtg
ccggaaggtctggacgaggatgccctggagccagtactggcaaatttccgcggcgatatc
caacaggtgccctcgatgtactcggcgctcaagcacaaagggcggccgttgtacgagtat
gctcgtgagggcattgaggttgagcgcccaccccgcccggttacgatctaccaactgatt
ctgctgaatgtccgcgccaatgaaatcgatctggcggtgaagtgtaccaagggcacctac
atccgctcgctggttgacgatattggtgaggcgcttggctgtggtgcccatgttaccgcc
ctgcgtcgaacgctggccgccggttttactctggaccaggttcatcgggtggacgatctg
gaggccatgcgggagcggggcgaaagcctggatggcctgctggtcaagcccgatgcggca
ttgagcatgttcccggagttgaccctggaaggggcatcgctggtatcgatattgaacggc
caaccggttagaatatcgggtcattctatatccggtccggtgcggttgtatggcgaccgc
ggatttgtcgggctgggagaaggatttgccgaaggcgacggctgcaagatcgttccccgt
cgtttggtaaaacacggctga
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