Marinobacter sp. CA1: J2887_03090
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Entry
J2887_03090 CDS
T10810
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
maca Marinobacter sp. CA1
Pathway
maca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J2887_03090 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maca03019
]
J2887_03090 (pnp)
03016 Transfer RNA biogenesis [BR:
maca03016
]
J2887_03090 (pnp)
Enzymes [BR:
maca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
J2887_03090 (pnp)
Messenger RNA biogenesis [BR:
maca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J2887_03090 (pnp)
Transfer RNA biogenesis [BR:
maca03016
]
Prokaryotic type
tRNA degradation factors
J2887_03090 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
UDL05768
LinkDB
All DBs
Position
665940..668048
Genome browser
AA seq
702 aa
AA seq
DB search
MNPVQKTFELGGKTVTLETGRIARQATGAVLVTIDDVSVLGTVVGAREPKPGQGFFPLTV
NYQEKTYSVGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPNGYMNEVQVVLTVMSAN
KTQDPDIAAMLAASAALAISGIPFDGPIGAARVGFENDRGYFLNPTFQELETSLLDMVVA
GTEDAVLMVESEAKGLTEDQMLGGVLFAHQEMQVAIQAIKDFAAENGKPRWEWTPEAENT
QLLEAIRSEFAAGIEEAYTIRDKMDRYARLGELKAAAVEKLAGEEEGQPSEDEVKKYFGK
VEKATVRQSVIDGKPRIDGRDTKTVRPIEVEVGVLPSTHGSALFTRGETQAIVTTTLGTA
RDTQIIDALEGERKDPFLFHYNFPPYSVGEAGRMGSPGRREIGHGRLAKRGVAAVMPTVE
EFPYTIRAVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAEGVTALQMDIKINGITDEIMEIALQQAYDARQHILGEMAK
VISVPRTELSSRAPSITTIKIHPDKIRDVIGKGGSTIRGICDETGASIDLDDDGNVKIYA
EDQASAQAAMKRVQEITAEIEVGAIYSGRVERIVDFGAFVNILPGKDGLVHISQISERRI
ENVTDELCEGQEVLVKVLDVDNRGRVKLSMKEVKEGEQPTEF
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccggtacagaaaacatttgaactcggcggcaagaccgtcaccctcgagactgga
cgcatcgcccgtcaggccactggtgccgttctggtaaccatcgacgatgtatccgttctg
ggtaccgttgttggcgcccgggagcccaagccgggccagggtttcttcccgctgaccgtg
aactaccaggaaaagacctactccgttggtaagattccgggaggcttcttcaagcgtgaa
ggccgtccttccgagaaggaaaccctgacatcccgtctgatcgaccgtcctatccgtccg
ctgttccccaacggctacatgaacgaagttcaggttgtcctgacggtcatgtctgccaac
aagacccaggacccggacattgctgccatgctggccgcctcggctgccctggcgatctcc
ggcattccgttcgacggcccgattggtgcggcccgtgtcggctttgagaacgatcgcggc
tacttcctcaacccgactttccaggagctggaaacatccctgctggacatggttgtggca
ggcaccgaagacgcggtgctgatggttgagtccgaggccaaggggctgaccgaggaccag
atgctgggtggcgttctgttcgcccaccaggaaatgcaggtggcaatccaggccatcaag
gacttcgccgccgaaaacggcaagccccgttgggagtggaccccggaagccgagaacacc
cagctgcttgaggccatccgcagcgagtttgccgctggcatcgaggaagcctacaccatc
cgcgacaagatggaccgctacgcccgtctgggcgagctgaaggcggctgcggtcgagaag
ctggccggtgaagaggaaggtcagccgtccgaagacgaagtgaagaagtacttcggcaag
gttgagaaggcgacggttcgccagtctgtcatcgacggcaagccgcgcatcgacggtcgt
gataccaagaccgtgcgtccgatcgaggtggaagtcggcgtactgccaagcacccacggt
tccgctctgttcacccgtggtgaaacccaggccatcgtgaccaccactctgggcaccgcc
cgtgacacccagatcatcgatgccctggaaggtgagcgtaaggacccgttcctgttccac
tacaacttccctccctactccgttggtgaggctggccgtatgggcagcccgggccgtcgt
gagattggtcacggtcgtcttgccaagcgcggtgtggctgccgttatgccgactgtggaa
gagttcccgtacaccatccgtgcggtgtctgagatcaccgagtccaacggttccagttcc
atggcttctgtctgtggctcgagcctggcactgatggacgccggtgtgccgatcaaggcg
ccggtggccggtattgccatgggtctggtcaaggaaggcgaaaagttcgccgttctgacc
gacatcctgggtgacgaagatcaccttggcgacatggacttcaaggttgccgggaccgct
gagggtgtgactgccctgcagatggatatcaagatcaacggcatcaccgacgagatcatg
gaaatcgccctgcagcaggcttacgacgcacgtcagcacatccttggtgaaatggcgaag
gtcatctctgtgccgcgtaccgagctgtcctcacgggcgccgagcatcaccaccatcaag
atccatccggacaagatccgtgacgtgatcggtaagggtggctccaccatccgtggtatc
tgcgacgaaaccggtgcctccattgatctggacgacgacggtaacgtcaagatctacgcg
gaagaccaggcgtctgcccaggcggcgatgaagcgggttcaggaaatcactgccgagatt
gaagtcggcgcaatctacagtggccgcgttgagcgcattgtggactttggtgccttcgtc
aacatcctgccgggtaaggatggtctggtgcatatctcccagatctccgagcgtcgcatt
gagaatgtgaccgacgaactctgcgaaggccaggaagtgctggtcaaggtgctggatgtg
gacaaccgtggtcgcgtcaagctttccatgaaggaagtcaaagagggcgagcagccgacg
gaattctga
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