Marinobacter sp. CA1: J2887_04110
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Entry
J2887_04110 CDS
T10810
Name
(GenBank) lipid A deacylase LpxR family protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
maca Marinobacter sp. CA1
Pathway
maca00540
Lipopolysaccharide biosynthesis
maca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
maca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
J2887_04110
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
maca01005
]
J2887_04110
Lipopolysaccharide biosynthesis proteins [BR:
maca01005
]
Lipid A
J2887_04110
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
UDL07263
LinkDB
All DBs
Position
complement(886165..887103)
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AA seq
312 aa
AA seq
DB search
MQPAQSDVVNLSWDNDLLTGSDRGYTNGLRLSYLTDRAEAPEGQRSTLARSLRDRLQWLP
GIGAAGTQHALATSLRQMMLTPENIATSEPQYDDLPYAGFLGLETTLWSWNRERITGYGI
GAGVVGPGSGAEQAQKWVHKITGSTQPRGWDNQLGSNLLVGIHAYHGRTLFRSGGQVENE
MAWVVGTELSGFRTNGTAALIWRMGRHLPVNFIPDYSGASPSIGLPGALDMAGSGWSAFI
GIGVEYVPYSYLDHEDGPYDLEQAPWVGQAGVGVDWHSPGFQISLIVRANTGEEDTHKEA
FSYGSVAVTWRL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcagccggcccagtccgacgtcgtcaacctgtcctgggacaacgatctgctgaccggc
agcgaccgcggctacaccaacggtctacggctttcctacctcaccgaccgggccgaggcg
ccagaaggccagcgcagcacactggcccgatcactgcgagatcgtctccaatggctgccc
ggcatcggtgcagccggcacacagcatgcactggcgaccagtcttcgccagatgatgctg
acgccagagaacattgccaccagcgagccccagtacgatgacctgccctacgccggtttt
ctggggctggaaaccaccctgtggagctggaatcgggaacgcatcaccggctacggcatc
ggtgcgggggtcgtgggcccgggcagtggcgcagagcaggcccagaagtgggtacacaag
atcaccggcagtacccagccccggggctgggacaaccagctcggcagcaacctgctggtg
ggcattcacgcctaccatggacgcaccctgttccgcagcggtggccaggtcgagaacgaa
atggcctgggttgtgggtaccgagctgtccggcttccgcaccaatggcaccgccgcgctg
atctggcggatgggccggcacttgccggtaaacttcattcccgattactccggtgcctcc
cccagcatcggcctgcctggcgccctggatatggcgggctcaggctggtccgcgtttatc
ggaatcggtgtggagtatgtgccttattcctacctggaccacgaggatggcccctacgac
ctggaacaggccccctgggtcgggcaggccggggtcggcgtcgactggcacagccccggc
tttcagatttcgctgatcgtgcgggccaacaccggcgaggaggacacccacaaggaggcg
ttctcctacggcagtgtggcggtcacctggcggctgtag
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