Marinobacter sp. CA1: J2887_04135
Help
Entry
J2887_04135 CDS
T10810
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
maca Marinobacter sp. CA1
Brite
KEGG Orthology (KO) [BR:
maca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maca03400
]
J2887_04135
Enzymes [BR:
maca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
J2887_04135
DNA repair and recombination proteins [BR:
maca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
J2887_04135
Prokaryotic type
J2887_04135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UDL05963
LinkDB
All DBs
Position
complement(893223..894755)
Genome browser
AA seq
510 aa
AA seq
DB search
MTTVVWFKRDLRLDDHGPLSAAAALAQPVIALYVVEPGYWQLDDTSERHWRFIAESLREL
DHQLRQRGNRLYLHYGSVPDALADLHRRCGIQRLFCHQETGGRWTFERDIAVAGWCQSHG
VTLSEWHQFGVVRRLANRDDWDHHWRQRMMADCLSPPPSLPAPPSTLPESRWREPTCRWN
TPCPERQPGGSHHGQRLLDSFLSQRCLGYQYRISSPNTAVSSCSRLSPHLAYGTVSLRRL
YQQSKQAGDAGVALPRKQRSLTRFRSRLHWHCHFIQKLEDEPELEFRAVHRDLEHLKSAP
DDPERLQRWQQGMTGWPLVDATMRALAHTGWINFRLRAMVMAVASYQLWLHWRQPALHLA
RLFTDFEPGIHYPQVQMQGGLTGINALRIYDPVRQSKQLDPHGQFLRQWLPELSGLPDDL
IHTPWLLSHNQQQRYGSQAYPKPICDHQLAARQARQAIGQFRQQRLTNDETRRVLSRHGS
RKGPKQSRPRPLIKDRQPPAMAQQLSLFDD
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggtggtgtggttcaagcgggacctgcgactggacgatcacggtccgctgtcg
gccgccgccgcgctggcgcagccggtgatcgccctgtacgtggtggagcccgggtactgg
caactggacgacaccagcgaacggcactggcgctttattgcagagagcttgcgggagctg
gaccatcagcttcgccagcgcggcaaccgcctgtacctccactatggaagcgtccccgat
gcgctggcagacctgcatcggcggtgcggcatccagcgcctgttctgccaccaggaaacc
ggcggccgctggacgtttgagcgggacatcgccgtggccggctggtgtcagagtcacggt
gtgaccctgtcggagtggcatcagttcggcgtggtgcgccgtctggccaatcgggatgac
tgggatcaccactggcgccagcgcatgatggcagattgcctgtcccctccgcccagcctg
ccggcaccgccatccaccctgcccgaaagccgctggcgtgaaccgacctgccgctggaat
acgccctgcccggagcgacagcccggtggcagccatcacgggcaacggttgctcgacagt
ttcctgagccagcgctgccttgggtaccagtaccggatctccagccccaatacggccgtc
agcagttgttcccggctcagtccgcacctggcgtacggcaccgtcagtctgcggcggctt
taccagcaatcgaaacaggcaggcgacgccggtgtggcgttgccacgaaagcagcgcagc
ctgacccgttttcggtcacggctgcattggcactgccactttatccagaaactggaagac
gagccggagctggagttccgggcagtacaccgggatctggaacacctgaaatccgcgccc
gatgacccggagcggttacagcgctggcaacagggcatgaccggctggccgctggtggat
gccaccatgcgggcgctggcccataccggctggatcaatttccggctgcgcgcgatggtg
atggcggtggccagttatcagctgtggttgcactggcgccagcccgccctccacctggcg
cggctgttcaccgattttgaacccggtatccactacccacaggtgcagatgcaaggaggc
ctgaccggcatcaacgccttgcggatctacgatccggtacgccaaagcaagcagctggac
ccacacggtcagttcctgcggcaatggttaccggaactgtcggggttaccggatgatctg
atccacaccccctggctgctgagtcacaaccaacagcaacgctatggcagccaggcttac
ccgaagcccatctgcgaccaccagcttgccgcccgccaggcgcgccaggccattggccaa
ttccgtcagcaacggctgaccaatgatgagactcgacgcgtgctgagccgacatggcagc
cgcaagggaccgaaacagtcacgccctcgcccgctgatcaaagaccgccagccgccagca
atggcacagcagttgtcgttattcgatgactga
DBGET
integrated database retrieval system
