Marinobacter sp. CA1: J2887_05625
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Entry
J2887_05625 CDS
T10810
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
maca Marinobacter sp. CA1
Pathway
maca02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
maca00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J2887_05625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maca03021
]
J2887_05625
Transcription machinery [BR:
maca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J2887_05625
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
PhyR_sigma-like
HTH_11
GerE
Xre-like-HTH
HTH_24
HTH_Tnp_ISL3
HTH_31
HTH_28
HTH_AsnC-type
HTH_Tnp_4
WHD_NWD1
Motif
Other DBs
NCBI-ProteinID:
UDL06239
LinkDB
All DBs
Position
1210085..1210600
Genome browser
AA seq
171 aa
AA seq
DB search
MAADELAQRRDINALYTGHHDWLQRWLSRQTGCSEMAADLAQETFLRVIHKQQKDQCFSI
SYPRRYLRMAANSLMIDLFRRRAVEQAYQEALAQRADTCTLPLEEREIILETLQRLDRLL
GQLPGPVRQAFLLSRLEGLTYAEIGDQLKVSERTVKRYMQQAFVLCLDLMV
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgatgaattggcacaacgacgggatatcaacgctctctacactggccatcat
gactggcttcagcggtggctgagcaggcagaccggctgctcggagatggctgcggatctg
gcccaggaaacgttccttcgggtcattcacaagcagcagaaagatcagtgtttctccatc
agttatccgcgccgttaccttcgcatggctgcaaacagcctgatgatagacctctttcgg
cgcagggcggtggagcaggcctatcaggaggctctggcgcaacgggcggatacctgcacc
ctcccgttggaagaacgggaaatcattctggaaaccctgcaacggctggatcgactgttg
gggcaactgccgggcccggttcgccaggcgtttctgctgtcccgcctggaggggctgacc
tatgccgagatcggtgaccaactgaaggtgtctgaacgaaccgtgaaacgatacatgcaa
caggcgtttgtcctatgtctggatctgatggtgtga
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integrated database retrieval system
