Marinobacter sp. CA1: J2887_07290
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Entry
J2887_07290 CDS
T10810
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
maca Marinobacter sp. CA1
Pathway
maca03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
maca00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
J2887_07290 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maca03019
]
J2887_07290 (orn)
03009 Ribosome biogenesis [BR:
maca03009
]
J2887_07290 (orn)
Messenger RNA biogenesis [BR:
maca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
J2887_07290 (orn)
Ribosome biogenesis [BR:
maca03009
]
Eukaryotic type
Pre-60S particles
RNases
J2887_07290 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UDL06550
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All DBs
Position
1566527..1567075
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AA seq
182 aa
AA seq
DB search
MAAADRLVWIDLEMTGLDPEQERIIEIATIVTDANLNILAEGPVIAIHQPDAVLDAMDEW
CTRTHGENGLTQRVRDSKTSEAEAEQQTLAFLREHLEAGQSPLCGNSIGQDRRFLVKYMP
ELEGFFHYRNLDVSTVKELARRWRPDVLAGVRKKGSHLALDDIRDSIAELQHYREQFFRM
EP
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgccgatcgcctggtttggattgatctggaaatgaccggactcgatccggag
caggaacgcattatcgaaatcgcgactattgtcaccgatgccaatctcaacatcctcgct
gaaggcccggttattgccatccatcagcccgatgctgtgctggatgcgatggacgaatgg
tgcacccgcacccacggtgagaacggcctgacccagcgggttcgcgacagtaagacttcg
gaagcggaggccgagcagcagaccctggctttcctgcgtgagcacctggaagctggtcag
tcaccgctgtgcggcaacagcattggccaggaccgtcgcttcctggtgaagtacatgccc
gaactggaggggttcttccactaccgcaacctggatgtcagcaccgtcaaggagctggcg
cgacgctggcgacccgatgtgctggccggagttcgcaagaagggctcccatctggctctg
gacgacattcgcgattccatcgccgaactccagcactaccgcgagcagttcttccgcatg
gagccctga
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