Marinobacter sp. CA1: J2887_10175
Help
Entry
J2887_10175 CDS
T10810
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
maca Marinobacter sp. CA1
Pathway
maca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J2887_10175 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maca03019
]
J2887_10175 (recQ)
03400 DNA repair and recombination proteins [BR:
maca03400
]
J2887_10175 (recQ)
Enzymes [BR:
maca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J2887_10175 (recQ)
Messenger RNA biogenesis [BR:
maca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J2887_10175 (recQ)
DNA repair and recombination proteins [BR:
maca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J2887_10175 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UDL07083
LinkDB
All DBs
Position
2226397..2228247
Genome browser
AA seq
616 aa
AA seq
DB search
MDFQQLSPSRPDSAQQSPEQVLHQVFGYEQFRPLQGDVVAEVVAGRNALVLMPTGGGKSL
CYQVPALVRPGTAVVISPLIALMQDQVAALQQLGVRAAFLNSTMDFHEARATENALMTGE
LDLLYCAPERLLQPRTLELLHQASLALFAIDEAHCVSQWGHDFRADYLGLTMLAEQFPNV
PRIALTATADERTRREIAERLSLTEARHFISGFDRPNIQYRITPKVNANKQLLDFIKSEH
QGDAGIVYCLSRNKVEATAKMLADKGYTALPYHAGLPAEDRARHQERFLREDGVIVVATI
AFGMGIDKPDVRFVAHLDLPKSLEAYYQETGRAGRDGSPSTAWMVYGLQDVIKLRQMLEG
SQGSDQFKRIERQKMDAMLGLCEVTGCRRQVLLRYFGDELDQPCNNCDTCLTPPETWDGA
LAVQKALSCVYRTGQRFGVTYLIDVLRGSENDRIRQSGHHKVSTFGIGEELSANEWKSVF
RQLVANGYLRADPEGYGALQLTEACRPLLRGEQPIRLRKDPVAKRTRGAGGSGSNKTTHH
VTDPEGWEALRACRKTLAEQQGVPPYVIFHDTTLLEILERRPATMAELAEVNGVGAAKLE
KYGETFLAELARLGAA
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagcaactctcccccagccggcccgactcggcccagcagtctccggaacag
gttcttcaccaggtcttcggttacgagcagttccgtcccttgcagggggatgtggtggcc
gaagtcgtggcgggacgcaacgccctggtgctgatgcccaccggtggcggcaagtcgctg
tgttaccaggtgccggcgttggttcggccaggcaccgcggtggtgatatcgccgctgatc
gcgttgatgcaggaccaggttgcagccctgcaacagcttggcgtgcgggcggcgtttctc
aattccaccatggatttccacgaggcacgggcaaccgagaatgccctgatgaccggcgag
ctggacctgctctactgtgcgccggagcggctgttgcagccccgtaccctggagttgttg
caccaggcttccctggcattgttcgcgattgatgaggcgcactgtgtgtcccagtggggc
catgatttccgggccgattacctgggcctgacgatgctggccgagcagtttccgaacgtt
ccccggattgccctgacggccaccgccgatgagcgcacccgccgggagatcgccgagcgc
ctgtcgctcaccgaggcgcggcacttcatcagtggctttgatcgcccgaacatccagtac
cgcatcactccaaaagttaacgcaaacaagcaactactggattttattaaatcagaacat
cagggtgatgccggcatcgtctactgcctgtcacggaacaaggtggaagccaccgcgaag
atgctggcggacaaaggctacacggccctgccctaccacgcaggcctgccggcggaagat
cgggcccgccaccaggagcgtttcctgcgggaagacggtgtcatcgtggtggccaccatt
gccttcggcatggggatcgacaagccggatgttcgctttgttgcgcacctggacctgccg
aaaagcctggaagcctactaccaggaaaccggtcgtgccggccgggatggcagcccgtcg
acggcttggatggtgtacggtctgcaggatgtcatcaagctccgccagatgctcgagggt
tcccagggcagcgaccagttcaagcgcatcgagcgacagaaaatggatgcaatgctgggg
ctttgcgaagtcaccggctgtcgccgtcaggtgttactgcgctatttcggagatgagctg
gatcagccgtgcaacaactgcgatacctgcctgaccccgcctgaaacctgggacggcgcc
ctggcggtgcagaaggccctgtcctgcgtctatcggaccgggcagcggtttggcgtcacc
tacctcattgacgtgctgaggggcagcgagaacgatcgtatccggcagtctggccaccat
aaggtgtcgacgttcggtattggcgaggagctcagcgccaacgaatggaagtcggtgttc
cggcaactggtggccaacggctacctgcgggcggacccggagggctatggcgcgcttcag
ctcaccgaggcctgccgcccattgctgcgcggggagcagcccatccggctgcgcaaggac
ccggtggccaagcgcacccgcggtgccggcggctcaggctccaacaaaaccacccaccac
gttaccgacccggaaggctgggaggcgttacgggcctgtcgcaagaccctggccgaacag
cagggtgtgcctccctacgtcatttttcatgacaccacattgctggagatcctcgagcga
cgaccggcaaccatggcagaactggccgaggttaacggcgtcggcgccgccaagctggaa
aaatacggcgagaccttcctggccgaattggcaagacttggcgccgcctga
DBGET
integrated database retrieval system
