Marinobacter sp. CA1: J2887_11045
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Entry
J2887_11045 CDS
T10810
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
maca Marinobacter sp. CA1
Pathway
maca03030
DNA replication
maca03430
Mismatch repair
maca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J2887_11045 (dnaX)
03430 Mismatch repair
J2887_11045 (dnaX)
03440 Homologous recombination
J2887_11045 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maca03032
]
J2887_11045 (dnaX)
03400 DNA repair and recombination proteins [BR:
maca03400
]
J2887_11045 (dnaX)
Enzymes [BR:
maca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J2887_11045 (dnaX)
DNA replication proteins [BR:
maca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J2887_11045 (dnaX)
DNA repair and recombination proteins [BR:
maca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J2887_11045 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
AAA_2
AAA_16
DUF3646
AAA_14
AAA_30
AAA_18
AAA_19
zf-CXXC
AAA_assoc_2
SKI
nSTAND3
Rad17
DnaX_C
TsaE
Motif
Other DBs
NCBI-ProteinID:
UDL03307
LinkDB
All DBs
Position
complement(2419877..2421910)
Genome browser
AA seq
677 aa
AA seq
DB search
MSYQVLARKWRPQTFQDMVGQEHVLQALVHALETQRLHHAYLFTGTRGVGKTTIGRLLAR
CLNCETGITPNPCGECTTCREIMEGRFVDLIEIDAASRTGVDDMRELTDNVQYSPTRGRY
KVYLIDEVHMLTNQSFNAFLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRMTP
EHIAGHLNHVLSQEGIPFEEAALWLLARAADGSMRDALSLTDQAIAFGNQKLAASDVSSM
LGTIDQRDIEKLVDALVAADGPGLLSEIQRVSDFAPDYGVILADLLSLFHRVTMEQVVPG
SVDNALGDAGKVQSLARQLSAEDAQLFYQSALMGRKDLAVTPDARMGFEMTLLRMLAFRP
GVERREPPTIAAQGAPALPENADEPGPAPVAEAEVTPTSVAASPATPAEPVSPVSSAPAP
SEPAPEPTASPVSEPGRGSETASPQPVESSPAANLIPESAPTEDGPPPASYDDLPPEYLA
YSDEPAAQNPAPEAVTPPEPVAPAPSVPDAEMAESVPAPPAPTGQPEPTEAVPASDQPEA
AGMDSPAPAPAAGEFHWPRDFRSLGIVGMPGNLASHAAMSRDGDTVVLTFDEGHARLLND
RHQDRIADALRQFFGDQVQLSVRQGHPGGDTPAAWEQRARQERQQAAEASIQNDPHVRSI
VERFEGRVVEDSIKPVS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgagctaccaggtactcgcccgtaagtggcgcccgcaaacattccaggacatggtaggg
caggagcatgtgcttcaggctctggtgcatgcactggagacccaacggctgcatcacgcc
tatctgtttaccggcacccgaggtgtgggcaagaccaccatcggcaggctgctggcccgt
tgcctgaactgcgaaaccggcatcaccccgaatccctgcggcgaatgcacaacctgccgg
gagattatggaggggcgttttgtcgatctgatcgagattgacgccgcctcacgaaccggg
gtggatgatatgcgggaactgacggacaacgttcagtactcgccgactcgcggccgctac
aaagtgtacctcatcgatgaggtgcacatgctcaccaaccagtcattcaatgcatttctg
aaaaccctggaagagccgccagagcacgtcaagttcctgctggcgaccacggatccccag
aagctgccggttaccgtgctgtcacggtgtttgcagttcaacctcaagcgcatgacgccg
gagcatatcgccggtcacctcaatcatgtgttgtcccaggagggcatcccgtttgaagag
gccgcattgtggctactggcacgggccgccgatggcagcatgcgggacgcgctcagtctc
accgatcaggccattgccttcggcaaccagaaactggcggccagtgatgtcagcagcatg
ctgggcacaatcgatcagcgggacatcgagaaactggtggatgccctggtggccgccgat
ggaccgggactgttgtcggagattcagcgagtgtccgattttgcaccggactacggtgtc
atcctggctgatctgttgtctctctttcatcgggtcaccatggagcaggtggttccgggc
agcgttgataatgccctgggggatgccggtaaggttcagtcgctggcgcgtcagctcagt
gctgaggacgcccagctgttttaccagagtgcgctgatgggacgaaaagacctggcagtg
acgccggacgcccgcatgggattcgaaatgaccctgctgcggatgctggcgtttcgcccc
ggtgttgagcgtcgtgaaccgccgacgatagcggcccagggcgcgccagcgctgccggag
aatgccgatgagcctgggccggcgcctgtagccgaagcggaagttacgccaacgagtgtg
gccgcaagcccggcgaccccagctgagccagtgtcgcccgtttcatcagcgccagcgcca
tcagaacccgcgccggaaccgaccgcatccccggtcagcgagccgggccggggcagtgag
acggcttcgccccagccggtcgagtcgtcaccagcggctaacctgataccggaatctgca
ccgacggaggatggcccgcccccggccagctacgatgatctgcctccggaatatctggcg
tacagcgatgagccagcagcccagaatccggcgccggaagcggtgacgccgcctgagccg
gtagcgccggcaccgtccgtgccagatgccgagatggcagaatccgtgccggcaccgcca
gcaccaaccgggcaacctgagccaaccgaagccgttcctgccagcgaccagccggaggcg
gcggggatggatagccccgcgccggcaccggcagcaggcgaattccactggcctcgggat
ttccgttccctggggattgtcggtatgccaggcaacctggccagccacgcagccatgagc
cgggacggcgatacggtcgtactgacgtttgatgaggggcatgcccgtctgcttaacgac
cgtcaccaggaccgtattgcggacgccttgcgtcagttcttcggtgaccaggttcagctc
tcggtacgccagggtcatcccggaggagacacccccgcggcctgggagcagcgcgcgcga
caggagcggcagcaggcggcagaggcttccattcagaacgatccccacgtgcgttccatc
gtggaacgctttgaaggcagggtggtcgaagactccattaaaccggtatcgtga
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