Marinobacter sp. CA1: J2887_12385
Help
Entry
J2887_12385 CDS
T10810
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
maca Marinobacter sp. CA1
Brite
KEGG Orthology (KO) [BR:
maca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maca03032
]
J2887_12385
03036 Chromosome and associated proteins [BR:
maca03036
]
J2887_12385
03400 DNA repair and recombination proteins [BR:
maca03400
]
J2887_12385
DNA replication proteins [BR:
maca03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
J2887_12385
Chromosome and associated proteins [BR:
maca03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
J2887_12385
DNA repair and recombination proteins [BR:
maca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
J2887_12385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HTH_40
HU-DNA_bdg
HU-CCDC81_bac_1
DUF5666
Plk4_PB1
Motif
Other DBs
NCBI-ProteinID:
UDL03543
LinkDB
All DBs
Position
complement(2717133..2717429)
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELVELIASKQTQLSVKDVELAVKTIIEHMSQSLADGQRIEIRGFGSFSLHYRAART
GRNPKTGEAVQLPAKYVPHFKPGKELREQVNDSMKQGF
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtccgaactggttgaactgattgcgtccaaacagacccagttgtccgtcaag
gacgtggagctggcagtcaaaacgattattgagcacatgtcccagtcgcttgcggatggt
cagcggatcgaaattcggggattcggcagcttttccctgcattatcgtgccgcccgcacc
ggccgtaatcccaagactggcgaggcagtgcaacttcccgccaagtacgtgccccatttc
aaacccggtaaagagctcagagagcaggtcaacgacagcatgaagcaaggcttctga
DBGET
integrated database retrieval system
