Marinobacter sp. CA1: J2887_12845
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Entry
J2887_12845 CDS
T10810
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
maca Marinobacter sp. CA1
Pathway
maca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
maca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J2887_12845 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maca03400
]
J2887_12845 (uvrB)
DNA repair and recombination proteins [BR:
maca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J2887_12845 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J2887_12845 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
DUF87
AAA_22
AAA_5
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UDL03626
LinkDB
All DBs
Position
complement(2821991..2824048)
Genome browser
AA seq
685 aa
AA seq
DB search
MASQDTESSKRTAFRVNSEFAPAGDQPTAIAELVDGIDSGLAHQTLLGVTGSGKTFTVAN
VIERVQRPTIIMAHNKTLAAQLYGEFREFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEK
DASVNEHIEQMRLSATKALLERPDAIIVATVSAIYGLGDPQSYLKMMLHLDRGDQIDQRY
ILRRLAELQYTRNDIEFHRANYRVRGDVIDVFPAESEKEAIRIELFDDEVENLSYFDPLT
GEVLRRVPRVTIYPKSHYVTPRQKVLDAVEEIKVELDQRLTQLRDDNRLVEAQRLEERTR
YDVEMMLELGYCNGIENYSRYLSGRRPGEAPPTLFDYLPPNALLVVDESHVTIPQIGAMF
KGDRSRKETLVEYGFRLPSALDNRPMRFEEWERIAPQMVFVSATPGSYEADHAGQVVEQV
VRPTGLLDPEIEVRPASTQVDDLLSEIHARVAVDERVLVTTLTKRMAEDLTDFLMEHDIR
VRYLHSDIDTVERVEIIRDLRQGQFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSE
RSLIQTIGRAARNVNGKAILYGDRVTGSMQRAIDETERRRIKQQAHNEEHGITPTGLRKK
IADIMEGATGGGRGRRKPERPGERAAEAAEQYRAKAGGHSPEELMKEISGLEDRMYKAAA
DLDFETAARLRDEIAELKEAAIRTA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggccagccaagacactgagtccagtaaacgcacagctttccgggtcaattcggagttt
gccccggcgggggaccagccgaccgccatcgcggagctggtggatggcatcgactccggc
ctggcgcaccagaccctgctcggggtgaccggctcgggcaagaccttcaccgtcgccaac
gtgatcgaacgggtgcagcggcccaccatcatcatggcccacaacaagaccctggcggcc
cagctttacggtgagtttcgcgagttcttccccgacaacgcggtggagtacttcgtgtcc
tactacgactactaccagccagaggcctatgtgccatcgtcggacaccttcattgagaag
gatgcttccgtcaacgagcacatagaacagatgcgactgtctgccaccaaggcgctgctg
gagcggccggatgccatcattgtggccacggtatcggcaatctatggtcttggtgatccc
cagtcctacctcaagatgatgttgcacctggatcggggcgatcagattgatcagcgctac
atcctgcgccggctggcggaactgcagtacacccgaaacgacattgagttccatcgcgct
aactaccgggttcgtggtgatgtgattgatgtgtttccggcggaatccgagaaagaggcc
atccgcatcgagctgtttgatgatgaggtggaaaacctcagctacttcgatccgctcact
ggcgaagtgttgcgacgggtcccgcgggtgaccatctaccccaagagtcactacgttacc
ccgcgccagaaagtgctggatgcggttgaggagatcaaggtcgagctggaccagcggctg
acccagctgcgggatgacaatcggctggtggaagcccagcggctggaagaacggacccgc
tacgatgtcgaaatgatgctggagttggggtactgcaacggcatcgagaactactcgcgc
tacctctccggtcgccgcccgggggaagcgccgccgacgctgttcgattacctgccaccc
aacgccctgttggtggtggacgagtcccacgtcaccattccgcagattggcgccatgttc
aaaggcgaccgctcccgcaaggaaaccctggtggagtacggcttccggctgccgtcggcg
ctggataaccgtcccatgcggttcgaggaatgggaacgcattgcgccacagatggtgttt
gtatcggcaacccccggcagctacgaagccgatcacgcaggtcaggtggtggagcaggtg
gtacggcctaccggtctgctggacccggagattgaggttcggccggcgtccacccaggtg
gacgatctgctgtcagaaatccacgcccgggtggcggtggatgagcgggtgctggtcacc
accctgaccaagcgaatggcggaagatctgaccgacttcctgatggagcacgacatccgg
gttcgctacctgcactcggacatcgacaccgtagagcgggtggagatcatccgcgacctg
cgccagggccagtttgacgtgctggtggggatcaacctgctgcgggaaggcctggacatg
cccgaggtgtccctggttgccatcctggatgccgacaaggaaggcttcctgcggtccgag
cgctcgctgattcagaccatcggccgtgctgcgcggaacgtcaacggcaaggccatcctc
tatggtgaccgcgtcaccggctcgatgcagcgggcgattgatgagactgagcgtcgccgc
atcaaacagcaggcccacaacgaagagcacggcattaccccgaccggtctgcgcaagaaa
atcgccgacatcatggagggggccaccggtggtggtcgtggccgtcgcaaaccggaacgt
cccggtgagcgggcggcggaagcggcggaacagtatcgcgccaaggctggtggccattct
ccggaagagttgatgaaagagatcagtggcctggaggaccgcatgtacaaggcggcggcg
gacctggatttcgagaccgcggcccgcctgcgggatgagatcgccgagctcaaggaagcc
gccatccggaccgcctga
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