KEGG   Marinobacter sp. CA1: J2887_15840
Entry
J2887_15840       CDS       T10810                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
maca  Marinobacter sp. CA1
Pathway
maca03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:maca00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    J2887_15840 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:maca03019]
    J2887_15840 (rnc)
   03009 Ribosome biogenesis [BR:maca03009]
    J2887_15840 (rnc)
   03036 Chromosome and associated proteins [BR:maca03036]
    J2887_15840 (rnc)
Enzymes [BR:maca01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     J2887_15840 (rnc)
Messenger RNA biogenesis [BR:maca03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     J2887_15840 (rnc)
Ribosome biogenesis [BR:maca03009]
 Eukaryotic type
  90S particles
   RNase
    J2887_15840 (rnc)
 Prokaryotic type
  rRNA processing factors
   J2887_15840 (rnc)
Chromosome and associated proteins [BR:maca03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     J2887_15840 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM DSRM_2 DUF3052 Ig_Let-653
Other DBs
NCBI-ProteinID: UDL04160
LinkDB
Position
complement(3480676..3481368)
AA seq 230 aa
MSSQPDLDRLQRRLGYQFKQPEYLLLALTHRSYGNQNNERLEFLGDSIVNMVIAEHLFLN
FEKAREGQLSRLRARMVKGVTLAEIGREFDLGRYLRLGSGELKSGGFRRDSILADTVESI
IGAIYLDSDFDTCREQVLIWFRQRLENLNLQDTQKDPKTRLQEFLQSRQYPLPQYEVISV
DGEAHAQTFHVSCALPSLDRKTTGVGSSRRLAEQQAARSALKALGVESEE
NT seq 693 nt   +upstreamnt  +downstreamnt
gtgagttcccaacccgatctagacaggctgcaacgccgccttggttaccagttcaagcag
cctgagtacctgctgctggctctgacccaccggagctacggtaaccagaacaacgaacgc
ctggaattccttggcgactccatcgtgaacatggtgatcgcggagcacctgttcctgaac
ttcgaaaaagcccgtgagggccagctcagtcgcttgcgggcccgtatggtcaagggcgtc
accctggccgagattggccgcgagtttgatcttggccggtatctgcgtctggggtccggt
gagctcaaaagtggtggttttcgacgggactcgatcctggcggatacggtggagtccatc
attggcgccatctacctcgacagcgatttcgatacctgccgggagcaggtgctgatctgg
tttcggcagcggttggaaaacctcaacctgcaggacacccagaaagatcccaagacccga
ctgcaggaattcctgcagtcgcggcaataccccttgccccagtacgaggtgatttcggtg
gatggcgaagcccacgcccagacctttcatgtctcctgtgcgttgccgtcgctggaccgc
aaaaccacgggtgtcggcagcagtcgccgactggcggaacagcaggctgcccgcagtgca
ctcaaggcgctgggcgtggagagtgaggaatga

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