Marinobacter sp. CA1: J2887_17260
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Entry
J2887_17260 CDS
T10810
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
maca Marinobacter sp. CA1
Pathway
maca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J2887_17260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maca03400
]
J2887_17260
Enzymes [BR:
maca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J2887_17260
DNA repair and recombination proteins [BR:
maca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J2887_17260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
Helicase_C
Zn_ribbon_PriA
ResIII
AAA_22
AAA_16
Zn_ribbon_6
Zn_ribbon_IS1595
Zn_ribbon_12
Motif
Other DBs
NCBI-ProteinID:
UDL04415
LinkDB
All DBs
Position
3783134..3785299
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AA seq
721 aa
AA seq
DB search
MTATARIALNRPLRRLFDYQIPDGCRIKPGQRVQIPFGRQFATGLVVDTNVTPPANIQLK
PLKRALEPWPALPAETLKLLTWAANYYQHPLGESLFMALPPALRRGQPAALPKETFWRLS
GREHSLPKQAHRQQALLDWLASEGKPQATRDVLAAGFSRSQLKGLAGKELVTECEPPERT
DSDPLTSPLPPLTEAQQLAFAKLPPVDGKFHCTLLYGVTGSGKTELYLHYLQNNLTADDQ
ALVLVPEINLTPQTVARFRRYFGDRIEVWHSALNDGQRLATWLRIREGKPVIVIGTRSAV
LLPFIKLQTLIVDEEHDSSYKQGEGFRYSGRDLAVFRGHLNQCPVILGSATPSLESYANT
QNGKYGLARLEQRVGSATAPEVRLLDIRSRPLEGGVSQPALSAIRRCLDSGQQALVFVNR
RGYAPVMMCFDCGHLMECPDCDSRLTYHQRDRALRCHHCDYQQAAPTVCPSCQSEAFKPI
GQGTERTEDTLTSLFPDVPVIRVDRDSTQRKGSIQSILERVNSGDPCILVGTQMLAKGHD
FPKVTLVVVVNADGGLFSVDFRAPEQLIQTLLQVSGRAGRSRDPGTVLVQTCHSDHPLLN
SLQQGRYLDIAQQLLTEREAAQLPPFRPMAIIRAEAPEMSESLAFLDQIRNTLTQDALEV
WGPLPALIARKAKRHRAQLVVLCEQRRGIREALKAACQQAEQLRTGRDFRWQIDVDPQET
A
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccactgcccgcatagcccttaaccgcccactaaggcgcctgttcgattaccag
attcccgatggctgtcgtatcaagcccggtcagcgagtccagattccctttggtcgacag
ttcgctaccggcctggtggtggacaccaatgtgacgccgccagccaacatacaactcaag
cccctcaaacgcgcactggagccctggccagcactgcccgctgaaaccctgaaattactg
acctgggctgccaactactatcagcatccgctgggcgaaagtctgttcatggccctgcct
ccggccctgcgaagggggcaacctgcggcgctgccgaaagagacgttctggcggctctcc
gggcgagagcactctttgcccaagcaggctcaccgccaacaggccctgctggattggctt
gccagcgagggcaaaccacaagcaacccgggatgtgctcgccgccggcttttcaagatcc
cagctcaaagggctggcgggaaaagagctggtcacagaatgcgagccgccggaacgcacc
gactcggaccccctgacatccccgctgccgccactgactgaagctcagcaactggcgttt
gcaaaactgcctccagtagacgggaagtttcactgcaccctgctctacggcgtgactggc
agcggcaagaccgagctctatctgcattacctgcaaaataacctgacggcagacgaccag
gcactggtactggtccccgagatcaacctcaccccccagacggttgcccgcttccggcgg
tatttcggtgaccgtatcgaggtctggcactccgccctgaatgacggacagcgattggca
acctggctgagaatccgcgagggcaagccggtgatcgtgatcggcacccggtcggcggta
ctccttccttttattaagctgcaaaccctgatcgtggacgaagaacacgacagctcctac
aaacagggggaaggctttcgctattccggccgggatctggcggtgttccgcgggcacctg
aaccaatgcccggtcatcctcggttcggccacgccctcactggagtcctatgccaacacg
cagaacggaaaatacggcctggcacgactggaacaacgggttggcagcgccaccgccccg
gaggtccgcctgttggacatccgcagccgcccccttgagggcggcgtgtcacaaccagca
ctaagcgccatccgccgctgccttgatagtggccagcaggctctggtgttcgttaatcgc
cgcggatacgccccggtcatgatgtgttttgactgcggccacctgatggagtgccccgat
tgcgacagccggctgacctaccatcagcgggatcgcgccctgcgctgccaccactgcgat
taccagcaggcggcaccgacggtttgcccgagttgccagagcgaggccttcaagcccatc
ggccagggcaccgaacgcactgaagacaccttgaccagcctgtttcccgatgtgccggtc
atccgggtcgaccgcgacagcacccagcgcaaaggcagcatccagtccattctggaacgg
gtaaacagcggcgatccctgcatcctggtcggcacccagatgctggccaagggccatgac
tttccgaaagtcaccctggtggtagtggtcaatgcggatggcggcctgttcagtgtcgac
tttcgcgcccccgaacaactgatacagaccctgttgcaggtgagtggtcgcgcgggccgc
agtcgcgacccgggcacggtattggtacagacctgccacagtgatcaccccctactgaat
tcgctacaacaggggcgttatctggacatcgcccagcagctgctgaccgagcgggaagct
gcccaactaccgccgttccgccccatggcaatcatccgagcagaagctccggaaatgtca
gaaagcctcgccttccttgatcaaataagaaacaccctgacgcaggacgccctggaagtc
tggggcccactgccggccctgatcgcccgaaaagcgaagcgacaccgggcccagttagtt
gtattgtgtgaacaacgccggggcattcgcgaggcgctgaaggcagcgtgccagcaggca
gaacagttgcgcaccggccgcgacttccgctggcagatcgacgtggacccccaggaaacc
gcttga
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