Marinobacter sp. CA1: J2887_18455
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Entry
J2887_18455 CDS
T10810
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
maca Marinobacter sp. CA1
Pathway
maca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
maca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J2887_18455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maca03400
]
J2887_18455
Enzymes [BR:
maca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
J2887_18455
DNA repair and recombination proteins [BR:
maca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
J2887_18455
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UDL04630
LinkDB
All DBs
Position
complement(4028969..4029775)
Genome browser
AA seq
268 aa
AA seq
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MRVVSISVNGLEQAVEKGFFDWLLKQGADVVCVQDHRMRAYEIEDRNLIPEGYEAYFIDG
ERNEDGGVGIYTRHFPKAIMYGFANEQADREGRFIQADFDKVSVACVLAPSALGKEDEPI
GEDDLTALDHKDAFMDAFGLHMQKTLRKRRQFIFCANLQTAHHVTDASSRYHQLDVSGFL
PHERAWLDRLFDEMGCIDAFREINKQSNQFTCWPEWAEGWRRNAGIRIDYQLLTPGIRKT
ILDGWIDNDTRFSDHAPVIMDYDIEIGF
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtagtatcaatcagcgtcaatggcctcgaacaggccgttgaaaaaggcttcttc
gactggttgttgaagcagggcgccgatgtggtctgtgtgcaggaccaccgtatgcgcgcc
tacgagattgaagaccgtaacctgattcccgaaggctacgaggcctacttcatcgatggt
gagcggaacgaggacggcggtgttggcatctacacccgccatttccccaaggccatcatg
tacggtttcgccaacgaacaggcggaccgggaaggtcgctttatccaggctgacttcgat
aaggtcagtgtggcctgtgtgctggcgccatccgccctgggtaaggaagacgaacccatc
ggtgaggatgacctgacagcgctggaccacaaagacgcctttatggacgccttcggtctg
cacatgcagaaaacccttcgcaagcgccggcaattcatcttctgcgccaatctgcagacc
gcccaccacgtcaccgatgccagctcccgttatcaccagctggatgtgtccggctttctg
cctcacgagcgtgcctggctggaccggctgttcgatgagatgggctgcatagatgctttc
cgcgagatcaacaagcagagcaaccagtttacctgctggcccgaatgggccgaaggctgg
cgccgcaatgcaggcatccgtatcgactatcagctgctgacgccggggattcgcaagacc
atccttgatggctggatcgacaacgacacccgcttctccgatcacgcgcccgtcatcatg
gactacgacatcgagatcggattctga
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