Macrococcus sp. IME1552: BHM04_02080
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Entry
BHM04_02080 CDS
T05070
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
macr
Macrococcus sp. IME1552
Pathway
macr03030
DNA replication
macr03410
Base excision repair
macr03420
Nucleotide excision repair
macr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
macr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BHM04_02080
03410 Base excision repair
BHM04_02080
03420 Nucleotide excision repair
BHM04_02080
03440 Homologous recombination
BHM04_02080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
macr03032
]
BHM04_02080
03400 DNA repair and recombination proteins [BR:
macr03400
]
BHM04_02080
Enzymes [BR:
macr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BHM04_02080
DNA replication proteins [BR:
macr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BHM04_02080
DNA repair and recombination proteins [BR:
macr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BHM04_02080
NER (nucleotide excision repair)
GGR (global genome repair) factors
BHM04_02080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
DNA_pol_A_exo1
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ATD30028
LinkDB
All DBs
Position
387574..390195
Genome browser
AA seq
873 aa
AA seq
DB search
MKEKLILIDGNSIAFRAFYALPLLKNSSELHTNAIYGFTLILEKLIKEEKPTHFLIAFDA
GKTTFRHATFGEYKGGRQKTPQELSEQFPHIRRLAEAYQIKHYELDNYEADDIIGTLSKE
AAEQKMETIIVTGDRDLTQLVNDYVTVYYTKKGVTDIDKYTPQFIHEKYGFGAEKIIDLK
GLMGDKSDNIPGVPGVGEKTAIKLLLEYDTVEGVIANLDKITAKKLNENLTNHQEDAVMS
KQLATIETNAPIEVSLADTVIPDKDETKKIELFRELEFKQMLENLDTTSQIESSKAIEIN
NDYQSFEFKAIDAIALHLKCYQDNYLKNEILGLGIMYNDETFVVQPEDITKNKSFIILLE
DENVKKHVYDAKAVKVMFERLSINIEGIAFDTMLANYLLNPSSTVVDVAQLGHDFGLNYV
ESDDHIFGKGAKAHVPDREILNQHIANEVHLINDVTPMITEKLIAHEQLALHDELELPLA
LVLAKMELQGIKVNKETLIEMQGEIQERLDALTESIYNHAGKSFNVNSPKQLGVILFEEL
KLPIIKKTKTGYSTAVDVLEKLQGSHAIIDDILVYRTLSKLQSTYVEGLQRLIGDDEKIH
TRFNQVIAQTGRLSSIDPNLQNIPVRLDEGRKIRKAFVPSGDDMVIFAADYSQIELRVLA
HITEDASMMEAFTHGIDIHTKTAMEVFDVEKDEVDSNMRRQAKAVNFGIVYGISDYGLSQ
SLGITRKAAQQFIDDYLDSFPKVKQYMDDIIQKAKRDGYVTTIMQRRRYIPDITSKNFNL
RGFAERTAMNTPIQGSAADIIKLAMVQFDKALKETNFKAKMLLQVHDELIFEVPKDEIDA
FSLFVKDIMEHAIELNVPLEVEYDSGESWYEAK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaactaatattaattgatggaaatagtatcgcgtttcgtgccttttatgca
ttaccgttactaaagaattcatcagagttacatacgaatgcaatttatggttttacgtta
attttagaaaagttaattaaagaagaaaaaccaacgcatttcttaatcgcatttgatgca
ggtaagacaacatttagacatgcaacgtttggagaatataaaggaggacgtcagaagaca
cctcaggaattaagtgagcaattcccgcacatcagaagacttgcagaagcttaccaaata
aagcattacgaattagataattacgaagcagacgatattatcgggacactttcaaaagaa
gcagccgaacaaaagatggaaacaattatcgtaaccggtgaccgagatttaacgcagcta
gtcaatgattatgtaaccgtttattacactaaaaaaggtgttacagacattgataaatat
acaccacaattcattcacgaaaaatatggatttggtgctgagaaaattatcgatcttaaa
ggcttaatgggtgataagtcggataatatccctggcgtacctggtgtcggagaaaagact
gcgattaaattgttattagaatatgatacggttgaaggtgtaattgcgaacttagataag
attactgcgaagaaactcaatgaaaatcttacaaatcatcaagaggatgctgtcatgagt
aaacagcttgcaacaattgagacgaatgcaccgatagaagtatctttagctgatacagta
atcccggataaagatgaaacgaaaaaaattgaactgttcagagaattagaattcaaacaa
atgctggaaaatctagatacaacaagtcaaattgagagtagtaaagcaatcgaaattaat
aacgattatcagtcatttgaattcaaagcgatcgatgcaattgccttacacttgaaatgc
tatcaggacaattatttgaagaatgaaatattaggattaggtattatgtacaatgacgaa
acatttgttgtacaacccgaagatattacgaagaataagtcatttatcatattgctggaa
gacgaaaatgtaaaaaaacatgtgtatgatgcgaaagcagttaaagtaatgttcgaacga
ttatcaataaatattgaaggtatcgcctttgatacgatgctggccaattatttattgaat
ccatcatctacagtggttgatgtcgcacaactcggacatgattttggattaaactatgtg
gagtctgatgatcatattttcggtaaaggtgcgaaagcgcatgtacctgacagagaaatt
ttgaatcagcacatcgcaaatgaagtgcatcttataaatgacgtaacacctatgattaca
gaaaagctcattgcgcatgaacaactcgcgctacatgacgaacttgaattaccacttgcc
cttgtgcttgcaaagatggaacttcaaggtattaaagtgaataaagagacattaattgag
atgcagggtgaaatacaagaaagattagatgcgttaacagaaagtatctataatcatgcc
ggcaaatcatttaatgttaactcaccgaaacaacttggtgtgattctatttgaagagtta
aagttaccgataattaaaaagacgaagacaggttactcaacggcagtagatgtattagaa
aagttacaaggtagtcatgcgattatcgatgatattttagtatatcgtacattatctaaa
ctacagtcaacgtacgttgaagggttacaacgattaataggtgatgatgagaaaattcat
acacgctttaatcaggttatcgcacaaactggtcgtctatcttcaatagatccgaacctg
cagaatataccggttagattagacgaaggtagaaagattagaaaagctttcgttccgagt
ggagatgacatggtaatctttgctgccgattattctcaaattgaattgcgtgtccttgct
cacattacagaagatgcgagtatgatggaagcatttacacatggtattgatattcatacg
aagacagcgatggaagtttttgatgttgaaaaagatgaggtagacagcaatatgcgtcgt
caggcaaaagctgttaatttcggtattgtttatggcattagtgattatggactaagtcaa
agtttaggtataacacgaaaagctgcacaacaatttatcgatgattatctggatagcttc
ccaaaagtgaaacaatacatggatgatattattcagaaagcaaagcgggatggttacgtt
acaacaattatgcagcgtagaagatatattcctgatattacgagtaagaactttaattta
agaggatttgctgaaagaactgcgatgaacacgccaatccagggaagtgcagcagatatt
attaaactagcgatggtacagtttgataaagcgctgaaagagacaaactttaaagcgaag
atgttattacaagtacacgatgaattgatctttgaagttccaaaagatgaaatagatgcg
tttagtctatttgtaaaagatattatggagcatgcaattgaacttaatgtaccacttgaa
gtagaatatgattctggtgaaagttggtatgaagcaaagtag
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