Macrococcus sp. IME1552: BHM04_02945
Help
Entry
BHM04_02945 CDS
T05070
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
macr
Macrococcus sp. IME1552
Brite
KEGG Orthology (KO) [BR:
macr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
macr03019
]
BHM04_02945
03009 Ribosome biogenesis [BR:
macr03009
]
BHM04_02945
Enzymes [BR:
macr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BHM04_02945
Messenger RNA biogenesis [BR:
macr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BHM04_02945
Ribosome biogenesis [BR:
macr03009
]
Prokaryotic type
rRNA helicases
BHM04_02945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ApbA
AAA_30
PhoH
Peripla_BP_4
Flavi_DEAD
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
ATD30192
LinkDB
All DBs
Position
555159..556487
Genome browser
AA seq
442 aa
AA seq
DB search
MDKHPFELFELAPYLVEAVEDLNFNQPTEIQRRVIPKLKKETHLIGQSQTGTGKSHAFLL
PLINKINKEVQHPQIIILAPTRELAKQLYDAAEHLISFTDDIKAGLYIGGTDKNKDIQKS
KVQPQIVIGTPNRIKDLAEENVLHIHLARAVVIDEADLMIDLGFLPTVDKIAANVSREAQ
IAVFSATIPKALHPFLNKYLSKPEFIEIEPDAKTNKNISFYLVPTKSNDRKEQLTKIMST
INPYLAIIFANSRERADEVAEYLQDQGLKVGVIHGGLAPRERTQQMKRVKNLEYQYVVAS
DLASRGIDIDGVSHVINYDIPRDIAFFTHRVGRTGRGNYTGVAITIYTPDEEDLINQIEK
SGFSFIHSDVKNGELVEIKDRTERQSRKKKEDNIEQNLKHKLKGKKKVKPGYKKKFRYEL
DKLKRNEKKAHSKRTNRENKKR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacacccatttgagttatttgaacttgcaccatatttagtagaagcggtggaa
gatttaaatttcaaccagcccacagaaatccagagaagagttattcctaaattaaaaaaa
gaaacgcacttaattggacaatcacaaacaggtacaggaaaatcacatgcatttttacta
ccgttaatcaataaaatcaataaagaggtacagcatcctcaaattattattcttgcaccg
actagagagcttgcaaagcaattatatgatgcagcagagcatttaatttcatttacagat
gatattaaagcaggactatatattggaggcacagataagaataaagatattcaaaaatca
aaagtgcagccacaaatagttatcggtacaccaaatcgaataaaagatttagcagaagaa
aatgtattacatattcatttagcaagagcagttgtaatcgacgaagcagacttaatgatt
gatttaggattcttgccgacagtcgataagattgctgcaaatgtatcccgtgaagcacaa
atagcagtattttctgcgacgataccaaaagctttacacccatttttaaataaatactta
tctaagccagaatttattgagattgagcctgacgcaaagacaaataaaaatatttctttt
tatcttgtacctacaaaaagtaacgatcgtaaagaacagttgactaaaattatgtctact
attaatccttatttagcaattatttttgcgaatagtcgtgaacgtgcggatgaagtagca
gaatatttacaggatcaaggtttaaaggtaggcgttattcatggcggtcttgcaccacgt
gagcgtacacaacaaatgaaacgtgtgaaaaatcttgaatatcaatatgttgttgcgagt
gatctagcgagtcgggggattgatatcgatggtgttagtcatgttatcaattatgatatt
ccacgtgatatagccttctttactcatcgtgtaggacgaactggccgaggaaattataca
ggagttgcaattacgatctacacgcctgatgaagaagatttaatcaaccagattgagaaa
agtggcttctcatttattcatagcgatgttaaaaatggtgaactcgttgaaattaaagat
cgaactgagcgtcaatcacgtaagaaaaaagaagataatattgaacagaacctaaaacat
aaacttaaaggtaagaaaaaagtgaagccgggttataagaagaaattccgatatgaattg
gataagttaaaacgtaatgagaaaaaggcccattctaaacgtacgaatagagagaataaa
aaaaggtag
DBGET
integrated database retrieval system
