Macrococcus sp. IME1552: BHM04_04795
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Entry
BHM04_04795 CDS
T05070
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
macr
Macrococcus sp. IME1552
Pathway
macr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
macr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BHM04_04795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
macr03019
]
BHM04_04795
03016 Transfer RNA biogenesis [BR:
macr03016
]
BHM04_04795
Enzymes [BR:
macr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BHM04_04795
Messenger RNA biogenesis [BR:
macr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BHM04_04795
Transfer RNA biogenesis [BR:
macr03016
]
Prokaryotic type
tRNA degradation factors
BHM04_04795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
EcoKI_5th
SPATA25
S1_2
Motif
Other DBs
NCBI-ProteinID:
ATD30535
LinkDB
All DBs
Position
complement(910527..912635)
Genome browser
AA seq
702 aa
AA seq
DB search
MSQEKKVFTTEWAGRPLTIETGQLAKQANGAVLVRYGDTVVLSTATASKEPRDVDFFPLM
VNYEEKLYAAGKIPGGFNKREGRPGEDATLTSRLIDRPIRPLFPKGYRNDVQVISIVMSV
DPNNSPEMAAMIGSSMALSVSDIPFDGPIAGVNVGLIDNKFIINPNVEAREQSILDLQVA
GHFDAVNMVEAGAKEVTEEKMLEAIMFGHDEIKKLVTFQKEIIAELNPVKKEFVPVETNT
EVEEAVTKQAEALNLAAAIQTQEKQAREERITAIKVQIVENFQEQGEEAIAIVNKTFDAL
VKAEVRRQITEDKVRPDGRRPDEIRPLSSEVGLLPRAHGSGLFTRGQTQAFSIATLGALG
EHQIIDGLGVEEEKRYMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALLQVIPDEKE
FPYTIRVVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVKKDEHYTILSD
IQGMEDALGDMDFKVAGTSKGITAIQMDIKIDGLSEDILREALEQARIGRLHIMEHMLST
ISEPSASLSPYAPKIKIIHINPDKIRDVIGPGGKKINEIIDATGVKLDIEQDGTVFIGSS
DEEMIAKAQELIENIVREAKVGEIYMSTVKRIEKFGAFVEIFPGKDALVHISQLAKERVN
KVEDVIKMGDQFLVKVTEIDKQGRVNASRKVLLEEETKKEEK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagagaaaaaagtatttacaacggaatgggctggccgtccattaacaatcgaa
acaggtcaacttgcaaaacaagcgaatggtgcagtacttgtgcgctatggtgatacagtc
gtattatcaactgcaactgcaagtaaagaaccgagagatgtggatttcttcccattaatg
gtaaattatgaagaaaaattatacgctgcaggaaaaattccaggaggctttaataaacga
gaaggtcgtcctggtgaagatgcaactttaacatctcgtctaattgatagaccgattcgt
cctttattcccaaaaggttacagaaacgatgttcaggttatttcaattgtaatgagtgtt
gatccgaacaactcaccagaaatggcagcaatgattgggtcttctatggcactttcagtt
tctgatattccttttgatggaccgattgctggcgtaaacgttggtttaattgataataaa
tttattattaatccgaatgtagaagcgcgcgaacaatcaattttggacttacaagttgct
ggacattttgatgcggtgaacatggtagaagcaggtgctaaagaagtaaccgaagaaaaa
atgttagaagctataatgtttggacatgatgaaattaaaaagttagtgactttccaaaaa
gaaattatcgcggaactgaatccagtgaaaaaagaatttgttcctgttgaaactaatact
gaagttgaagaagctgtaacaaagcaagctgaagcattaaatttagctgcagcaattcaa
acacaggaaaagcaagcgcgtgaagaacgtattactgcgattaaagtacaaattgttgaa
aacttccaggaacaaggggaagaagctatcgcaatcgttaataaaacatttgatgcttta
gttaaagctgaagtgcgtcgccaaattacagaagataaagtacgtccagatggtcgtcgt
cctgatgaaatcagaccattatcttctgaagtaggtctgttacctcgagcacacggttct
ggtttatttacacgtggtcaaacacaagcgttctctattgcaactttaggtgcattgggt
gaacatcaaattattgatggtcttggtgtagaggaagaaaaacgctatatgcatcattat
aatttcccgaacttctcagttggtgaaacaggtccagtgcgtgcacctggacgtcgtgaa
ataggtcatggtgctttaggtgaacgtgctttattacaggtaattcctgatgagaaggag
ttcccatacacaatccgtgttgtttcagaagtattagaatcaaacggttcaagttctcaa
gcctcaatctgtggatctactttagcgttaatggatgctggtgttcctattaaagcacca
gtagctggtattgctatgggactagtaaaaaaagatgaacattataccattttatctgat
attcaaggtatggaagatgcattaggagatatggactttaaggtggcaggtacatccaaa
ggtattactgcaatccagatggatattaaaattgatggattatcagaagacattttacgt
gaagctttagaacaagcacgtatcggtcgtctgcatattatggaacacatgttatctaca
atcagtgaaccaagcgcttcactgagcccatatgcgccgaaaattaaaatcattcatatc
aatccagataaaatcagagatgtcattggaccaggtggtaagaaaatcaatgaaatcatt
gatgcaactggtgttaaattagatatcgaacaagacggtactgtatttatcggctcaagt
gatgaggaaatgatcgctaaagcgcaggaattaattgaaaatatcgtgcgtgaagctaaa
gttggtgaaatttatatgtcaacagtgaaacgtattgagaagttcggtgcattcgttgaa
atcttcccaggtaaagatgcacttgttcatatttcacaacttgcaaaagaacgtgtcaat
aaagttgaagatgtgattaagatgggagatcagttcttagtaaaagtaactgaaatagat
aaacaaggtcgtgtgaacgcatctcgtaaagttttacttgaagaagaaactaaaaaagaa
gaaaaataa
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