Macrococcus sp. IME1552: BHM04_09090
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Entry
BHM04_09090 CDS
T05070
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
macr
Macrococcus sp. IME1552
Pathway
macr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
macr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BHM04_09090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
macr03021
]
BHM04_09090
03400 DNA repair and recombination proteins [BR:
macr03400
]
BHM04_09090
Enzymes [BR:
macr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BHM04_09090
Transcription machinery [BR:
macr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BHM04_09090
DNA repair and recombination proteins [BR:
macr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BHM04_09090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF961
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ATD31334
LinkDB
All DBs
Position
complement(1764428..1765372)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPRIETVEISEDSKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKNIEIEG
VLHEFSAVENVVEDVTTMIMNIKKLALKIYSDEDKMLEIDVKDEGVVTAKDIMHDSDVEI
LNPDLKIATVSKGGHLKMRLVANAGRGYTLAEDNNTSDLPIGVIPVDSIYTPVERVNYTV
ENTRVGQSTNFDKLTLDVWTDGSLTPQEAISLGAKIMTEHLNIFVDLTDEAQNAEIMIEK
EEDHKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVK
FKLEDLGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaatcgaaaagcctagaattgagacagttgaaattagtgaagattctaaattc
ggtaaattcgtagttgaaccgttagaacgtggttatggtacaacattaggaaactcctta
cgtcgtatcctattatcttcattaccaggtgcggctgttaagaatattgaaatcgaaggt
gtcttacatgaattctcagctgttgagaatgtagtggaagatgttacaacaatgatcatg
aacatcaaaaagcttgcgcttaaaatctactctgatgaagataaaatgcttgaaattgat
gtgaaagatgaaggcgttgttactgcgaaagatattatgcatgacagtgatgttgaaatt
ttaaatcctgatttaaaaattgcaacagtatctaaaggtggacacttaaaaatgcgtttg
gttgcaaatgcaggacgtggttacactttagctgaagataataacacaagtgatttacca
attggagtaattccagttgattcaatctacacaccagttgagcgtgtaaactacacagta
gaaaatacacgtgttggacaaagtactaactttgacaaattaactttagatgtatggact
gacggatcattaacaccacaagaagcaatttctttaggtgctaagattatgacagaacat
ttaaacatcttcgttgacttaactgatgaagcacaaaatgctgaaatcatgattgaaaaa
gaagaagatcacaaagaaaaagtacttgaaatgtcgattgaagaacttgatttatcagtt
cgttcttataactgtctgaaacgtgcaggtattaattctgttcaggaattagccgacaaa
tcagaagctgatatgatgaaagttcgtaacttaggacgcaagtctttagaagaagttaaa
tttaaattagaagacttaggtctcggattaagaaaagaagactag
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