Marinobacter adhaerens: HP15_1514
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Entry
HP15_1514 CDS
T01922
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mad
Marinobacter adhaerens
Brite
KEGG Orthology (KO) [BR:
mad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mad03032
]
HP15_1514
03400 DNA repair and recombination proteins [BR:
mad03400
]
HP15_1514
Enzymes [BR:
mad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HP15_1514
DNA replication proteins [BR:
mad03032
]
Prokaryotic type
DNA Topoisomerases
HP15_1514
DNA repair and recombination proteins [BR:
mad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HP15_1514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
DUF2399
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
ADP97278
UniProt:
E4PL70
LinkDB
All DBs
Position
1592045..1594687
Genome browser
AA seq
880 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGSDFIVKSSVGHIRDLPVSGSGSQSDPKERAKQAAITRK
MSPEEKAVHKKRKSREQLVARMGVDPDQDWSARYEILPGKEKVVSELKRLAKSADHIYLA
TDLDREGEAIAWHLQQTIGGEPEKYRRVVFNEITKRAIQEAFKDPGTLDNNRVNAQQARR
FLDRVVGYMVSPLLWAKLARGLSAGRVQSVAVRLIVEREREIRKFVPEEFWQLHADLASA
KADQPVRFEVTRHEDKPYRPVNEQQSSDHVSRLKAGTFKVAKREDKPTRSRPSAPFITST
LQQAASNRMGFSVKKTMMLAQRLYEAGFITYMRTDSTNLSQDAINSCRAYIEKQFGDKYR
PEKPRVYGSKEGAQEAHEAIRPTEVSRRPADISGLEKDAEKLYDLIWRQFIACQMSDAEF
LSTSIVVANGDYELRTRGRIIKFDGFLKAAPQAAKKDEDIALPDIKVDEVLDLKKLDPTQ
HFTKPAPRYTEASLVKELEKQGIGRPSTYASIISTIQDRGYVRLQNRRFYAEKMGEIVTE
RLSESFPNLMDFDFTARMEDELDEIAEGDVEWKKVLNDFYGRFRQQLEKAESGEDGGMRA
NTPTETDIPCPSCGRNMQIRVASTGVFLGCSGYSLPPKERCKTTINLVSGDEVVSADDDV
EGEGETRLLRKKRRCPKCGTAMDSYLVDETRKLHVCGNNPDCSGYEVEKGTFRIKGYDGP
TLECDKCGSEMQLKTGRFGKYFGCTNAECKNTRKLLKNGEPAPPKMDPVPMPELQCQKVD
DTYVLRDGASGLFLAASKFPKNRETRPPLVMEIKPHRKEIDPKYDYLMDAPERDPEGNPT
VIRYSRKSKEQYVMSEKDGKATGWSAWYVNGKWQPQDKKK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaagtctcgtaattgtcgagtcaccagcgaaagcgaagaccatcaacaagtac
ctgggctctgacttcatcgtcaaatcgagcgtcgggcacattcgtgatcttcccgtcagt
ggcagcggatcccagtccgatcccaaagagcgtgccaagcaggctgctatcacccggaag
atgagccctgaagagaaggcggttcataaaaagcgcaagtcccgcgaacagctggtcgcc
cggatgggtgtagatccggaccaggactggagtgcccgttacgagatccttcccggcaaa
gagaaggtggtcagcgaactcaagcgtttggccaaatcagcagatcatatctatctggca
acggatttggaccgcgaaggggaggccatcgcctggcaccttcagcagaccattggtggc
gaaccagagaagtaccggcgcgtggtgttcaacgaaatcaccaagcgtgcgattcaggaa
gcgttcaaggatccaggcactctcgacaataaccgggttaacgcacagcaggcccgtcga
ttcctcgaccgggttgttggctatatggtgtcgcccctgctttgggccaagcttgcccgc
ggcctctccgccggccgtgttcaatccgttgcggtgcggctgatagttgagcgtgaacgt
gaaatccggaagttcgttccggaggagttctggcagttgcacgccgatctggcgtctgcc
aaggccgatcaaccggtccgtttcgaggtgactcgccacgaggacaagccctatcgtccg
gtcaatgagcagcagagcagtgaccacgtcagccggctgaaggcgggtacgttcaaggtt
gccaagcgggaagacaagccgacccgttcgcggccgtccgcgccgtttattacgtctacg
ctgcagcaggctgccagtaaccggatggggttcagcgtcaagaagacgatgatgttggcc
cagcgtctttatgaggccggtttcattacctacatgcggacggactcaaccaatctgagt
caggatgcgatcaacagttgccgtgcgtatatcgaaaagcagttcggcgacaaataccgg
cccgaaaagccccgtgtctacggcagcaaagagggcgcccaggaggcgcacgaggccatt
cgcccaaccgaagtcagccgtcgtccggcggatatcagtggccttgagaaggatgccgag
aagctctacgacctcatatggcgtcagtttattgcctgtcagatgtccgacgccgaattc
ctgagtacgtccatcgtggtggccaatggcgactatgaactccgtacccggggccggatc
atcaagttcgacggcttcctgaaggcagcaccccaggccgccaagaaagacgaagacatt
gctctgcctgacattaaggtggatgaagtgctggatctcaagaaactggatcctacgcag
cactttaccaagccggcgcccaggtacaccgaggccagcttggtcaaggagctcgaaaag
cagggcattggccgtccgtcgacctacgcatcgattatttccacgattcaggatcgcggc
tatgtgaggctgcagaaccgtcggttctacgccgagaagatgggtgagatcgttaccgag
cgcctgtcggaatcttttccgaacctgatggacttcgatttcaccgcgaggatggaagat
gagctcgacgagattgccgagggcgatgtcgagtggaagaaagtcctgaatgacttttac
ggtcggttccggcagcagctggaaaaagccgagagtggtgaagacggcggcatgagggcc
aacacgccgactgaaacggacattccatgcccgagctgtggccggaacatgcagatccgg
gtggccagcactggtgttttcctgggttgctctggctattccttgccaccgaaagagcgt
tgcaagactaccattaacctcgtatccggtgatgaggttgtcagcgccgacgatgacgta
gagggtgagggcgaaacccgtctgctgcgcaagaaacgtcgctgccccaagtgtggcacc
gccatggacagctacctggtggacgaaacccgcaagctgcatgtttgcggtaacaatccg
gattgctctggctacgaggtggaaaagggcaccttccgcatcaagggctacgatgggccg
actcttgagtgcgataagtgtggctccgagatgcagcttaaaaccgggcgttttggcaag
tatttcggatgcaccaatgccgagtgcaagaatacccgcaagttgctgaaaaatggcgag
cccgctccgcccaaaatggacccggtgccaatgcccgagctccaatgtcagaaagtcgat
gatacttacgttctcagggatggtgcgtccggtttgttcctggctgccagcaaattcccg
aaaaaccgggaaacgcggccaccgctggtgatggagattaaaccgcaccgcaaggagatt
gatccgaagtacgattacctgatggatgcgcccgagcgtgaccccgagggtaatccgacg
gtgattcgctacagccgtaagagcaaggagcagtacgtcatgtcggaaaaggatggcaag
gcgacgggctggtctgcgtggtatgtgaacggtaagtggcaaccacaggacaagaaaaag
taa
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