Marinobacter adhaerens: HP15_247
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Entry
HP15_247 CDS
T01922
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mad
Marinobacter adhaerens
Pathway
mad00300
Lysine biosynthesis
mad00470
D-Amino acid metabolism
mad01100
Metabolic pathways
mad01110
Biosynthesis of secondary metabolites
mad01120
Microbial metabolism in diverse environments
mad01230
Biosynthesis of amino acids
Module
mad_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mad00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HP15_247 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HP15_247 (lysA)
Enzymes [BR:
mad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HP15_247 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ADP96011
UniProt:
E4PK80
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All DBs
Position
235559..236809
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AA seq
416 aa
AA seq
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MDHFNYRDGELYAEDIPVSAIADRFGTPAYVYSRATLERHYRAYDDALRDHPHLVCYAVK
ANSNLAVLNVLARLGAGFDIVSAGELERVLRAGGDPSRVVFSGVGKQEWEMKRALEVGVR
CFNVESDTELDRLNAVAGELGVKAPISLRVNPDVDAGTHPYISTGLKENKFGIDIAEASQ
VYARAAGMPNLDVKGVDCHIGSQLTSVSPFLDALDRVLALIDSLADQGIHIHHLDMGGGL
GVTYNQEQPPQPSDYVKALAERLGDRKLELILEPGRSIAANAGILVTRVEFLKCTEHRNF
AIIDAAMNDLIRPALYSAWQAIIPVKPHQDGEEKAWDLVGPVCETGDFLGKDRHLRLQAG
DLLAVRSAGAYGFVMSSNYNTRNRPPELMVDGDQVHVVRRRETLEDQLAPESCLPE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatcatttcaactaccgcgacggcgagctgtacgccgaggatatccctgtctctgcc
attgccgatcgttttggcacaccggcctacgtgtattcgcgcgccacgcttgagcgacat
taccgggcctatgatgacgcccttcgggatcacccgcacctggtgtgctacgccgttaaa
gccaatagcaatctggcggtgctgaacgttctcgcgcggctcggtgccggctttgatatc
gtgtcggccggtgagctggagcgggtactgcgggccggtggtgatccgtcgcgggtggtc
ttctccggcgttggcaagcaggaatgggaaatgaagcgggcccttgaagtgggcgtgcgc
tgcttcaacgtcgaatccgataccgaactggacaggctcaatgcggtggcgggagaactc
ggcgtaaaggcgccgatctctctgcgggtgaacccggatgttgatgccggtacccatccc
tatatttccacgggtctgaaagagaacaagttcgggattgatattgccgaagcgtcgcag
gtctatgcccgtgcggcaggtatgccgaatctcgacgtgaagggtgtggattgtcacatc
ggctcacagctgacgagcgtgtcaccgttcctcgacgcactggaccgagtgctggccctg
attgattccctggcggaccagggcatccacattcatcacctggatatgggcggtggcctg
ggcgtcacctacaaccaggagcagccaccacagccgtcggattacgtgaaagcgctggcc
gagcgcctgggtgaccgcaaactggagctgattctggagcccggccgatccattgccgcc
aacgctggcatcctggttaccagagtcgaattcctgaagtgcaccgagcaccggaatttt
gccatcattgatgccgccatgaatgatctgatccggccggccctgtacagcgcctggcag
gcgattatcccggtcaagccacaccaggatggtgaggaaaaggcctgggatctggttggt
ccggtctgtgaaaccggcgatttcctgggcaaggaccgtcacctgcgcctgcaggccggg
gatctgctggcggttcgctctgcgggagcctatggctttgtcatgagctcaaactacaac
acgcggaaccggccgccggaactcatggtcgatggcgaccaggtgcatgtggtccgccgc
cgtgaaactctcgaagaccagctcgcacccgagagctgccttccggaatga
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