Marinobacter adhaerens: HP15_3607
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Entry
HP15_3607 CDS
T01922
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mad
Marinobacter adhaerens
Pathway
mad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HP15_3607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mad03019
]
HP15_3607
Enzymes [BR:
mad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HP15_3607
Messenger RNA biogenesis [BR:
mad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HP15_3607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
Utp25_C
HEM4
CMS1
AAA_22
HI1480
Motif
Other DBs
NCBI-ProteinID:
ADP99371
UniProt:
E4PGR2
LinkDB
All DBs
Position
complement(3802798..3804120)
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AA seq
440 aa
AA seq
DB search
MSFSSLGLSEQLVRATSDQGYETPSPIQAQAIPAVLSGRDVMAAAQTGTGKTAGFTLPLL
QRLGENPRTGKGPRALILTPTRELAAQVHDSVNLYSKYIPTKAAVVFGGVKINPQMMKLR
KGLDVLVATPGRLMDLYQQNAVRFNEVEILVLDEADRMLDMGFIRDIRKILSLLPAKRQN
LLFSATFSNEIRTLAEGLLDNPVQVEVAARNTSAENIKQSVYPVDQSQKTALLSKLVRDN
SWDQVLVFTRTKHGANRLTQKLEKDGITAAAIHGNKSQGARTRALADFKAGEVRVLVATD
IAARGLDIKQLPQVVNFELPNVPEDYVHRIGRTGRAGESGHALSLVSADEGKMLAGIERL
IKKQLPRTEVEGFEPTNNLPLKPKAKADPSRARNRNGNGGGNGRPGGKPKSFGAKPGGRS
GGRSQNGGGQRSRPAQRQSA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttcttcactcggtttgtccgagcagctggtccgtgccacgtctgaccagggt
tatgaaaccccgtctcccattcaggcccaggccattcctgccgtgctttctggccgggac
gttatggcggcagcccagaccggtaccggcaaaaccgccggctttaccttgcccttgctg
cagcgtctgggtgaaaacccgcgcactggcaaaggcccccgcgccctgattctgacgccc
acccgtgaactggcggcgcaggttcatgacagcgtgaatctttacagcaaatacattcca
accaaggccgccgtggtcttcggtggtgtgaaaatcaatccgcagatgatgaagctgcgc
aaaggcctggacgtgctggtggcaacaccgggtcgtctgatggacctgtatcagcagaat
gctgtgcgcttcaacgaagtggaaatcctggttctggacgaagccgatcgcatgctggac
atgggctttatccgcgacatccgcaagatcctttcgttgttgccggccaagcgccagaac
ctgctgttctccgccaccttctccaacgagatccggactctggcagaaggtctgctggat
aacccggttcaggttgaagttgcggctcggaatacctctgccgaaaatatcaagcagtct
gtctatccggtagatcagagccagaagacagcgctgctgagcaagctggttcgcgataac
agctgggatcaggtgctggttttcacccgcaccaaacacggtgccaatcgcctgacccag
aagctggagaaggacggtattacggctgctgccatccatggcaacaagtcacagggtgcc
cgtacccgcgcgctggcggattttaaagctggcgaagtacgtgtgctggtggcgacggat
atcgccgcccgtggcctggatatcaagcagctgccccaggtagtgaactttgaactgccc
aacgtaccggaagattacgtgcaccgtatcggccgtaccggccgtgccggtgaaagtggt
cacgccctgtctctggtcagtgccgatgagggcaagatgctcgccggtatcgaaagactg
attaaaaagcagctgccgcgcacggaagtggaaggctttgagccgaccaacaacctgccg
ctgaagcccaaggccaaggcagaccccagccgcgcccgcaaccgcaatggtaacggcggt
ggcaatggtcgtcccggcggaaagccgaagagcttcggcgccaagccgggtggtcgcagc
ggtggccgtagccagaatggcggtggtcagcggagtcgtccggcccagcgccagagtgcc
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