Marinobacter adhaerens: HP15_3714
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Entry
HP15_3714 CDS
T01922
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mad
Marinobacter adhaerens
Pathway
mad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HP15_3714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mad03400
]
HP15_3714
Enzymes [BR:
mad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HP15_3714
DNA repair and recombination proteins [BR:
mad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HP15_3714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ADP99478
UniProt:
E4PHZ2
LinkDB
All DBs
Position
complement(3927234..3930860)
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AA seq
1208 aa
AA seq
DB search
MAALSTEPTEQRARIEPGFHAIHANHLEDLRRAVVYICRHNPMPPLESETFLVQSNGIAQ
WLKLALAEKRTEDGLEGGLGIAAGMDFLFPARFIWQAYRAVLPDGEVPEQSPFDKRRLVW
RLYRLLPRLVGQDEAFTPLARFLEGNDPDLRNFQLAEKVADLFDQYQVFRADWLAAWEQG
KDVIITARAEEKPLDAETRWQPLLWRRLVEDVGADAHTSRSQIHTRFMEQGQRLQAPANP
SRLPTRIVVFGVSSLPRQALEALYVLSRFSQVVLCVHNPCQFYWADIISDRELLTAERKR
GRTHPTLSAIEDPDQLHQHANPLLAAWGKQGRDYIRLLDEFDNPDQYRGSFQTPDQKIDI
FSDHGNPEAPRLLHQLQNDIHNLTPLREIRQQQRQLDVQQDHSLAFHQAHSPQREVEILH
DQLLAAFNVDPTLRPRDVIVMVPDINVYAPHIQAVFGRYQPGRKRHIPFTISDQGQRHHE
PVLIALETLMSLPRSRFAVSEIISLLEVPGIRDRFGINEDEIPLARRWVEGANIRWGLHG
QHRESLDLPAELERNTWQSGLRSMLLGYGMGDDEPWAGVEPFGEIGGLQASLAGRLNDFV
HQLETLWQALQTHRTPDEWEHLFSEMLGQFFHKVEGSDLLLLNRFRRQLEQWLEDALAAG
LEEQTLPLNIVKDVLLEGLDEGGLNQRFLAGKVNFATLMPMRAIPFRKVCLLGMNDGDYP
RSRPPVDFDLMAQDYRPGDRSRREDDRYLFLEALLSARAQLYISWVGRSIKDDSERPPSV
LVGQLQDHLDSLWSVSGQPETKVIEALTTQHPLQPFSRSYFPKANGLEEGGKGENSSPRP
LAEVLEARRLFTYEREWRSAHGGEAAAQTQSALPYQAPEEPISLNDLAAFLKKPIDTFYQ
RRLQVRFEDVEDDDTDNENFELDGLDRWRLDNELIQDGLLKASSDEELHDRLQATLDRMA
RRGDLGMGVTEHRLRSELAGRLPDLFERYQNALADWPEAVAEPLPFDYRFESALGSVEIA
DLIDNLRCNAQGELCRLVVASSSLLTGSGSSKKVRYANLMRDWLIHLAGQLGGQPFETLV
LGKEEGRKFRFAPLHPERARPLFETVLSGWMDATTRALPIHCEAGFAWITSFYGSKKYVG
DHERAISEAQQAYSIALKRDTGYLRGAFETPELLMASSEFEALLHQLYVPVWEAEQDKSA
ADQIGGLE
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggccgcactctccaccgagcccaccgagcaacgcgccaggatcgaacccgggtttcac
gcgatccacgccaaccatctggaagacttgcgccgggccgttgtctacatctgtcggcac
aacccaatgccgccactggagagcgagaccttcctggtgcagagcaacggcattgcccag
tggctgaagcttgcgctggcggagaagcgcaccgaagatggccttgagggcggccttgga
attgctgccggtatggatttcctgttcccggcccggtttatctggcaagcctaccgggcc
gtgcttccggacggtgaggtaccggaacagtcgcccttcgacaaacggcggctggtgtgg
cggctgtaccggttattgccacgtctggtggggcaggacgaggccttcacacccctggcc
cggtttctggaaggtaacgatccggacctgcgcaatttccagctggcggagaaggtggcg
gatctgtttgaccagtaccaggtgttccgggccgactggctggccgcctgggagcagggc
aaggacgtgattatcacggcccgggccgaggaaaagcctctggatgcggaaacccgctgg
cagcccctgctctggcgccggctggttgaggatgtgggcgcagacgctcataccagccgc
tcgcagatccatacccggttcatggaacagggccagcgacttcaggcgccggccaacccg
tcccggctgccgacccgcattgtcgtctttggcgtctcctcactgccccggcaagcgttg
gaagccctgtacgtgctgagccggttcagtcaggtagtgctgtgtgttcacaacccctgc
cagttctactgggccgacatcatcagcgaccgggagctactcaccgccgaacgtaaacgg
ggcaggacccatccgacactttccgccattgaggatccggaccagctgcaccagcacgcc
aatccactgctggccgcctggggcaagcagggccgggactacatccggctgctggacgag
ttcgacaacccggatcagtaccggggcagcttccagactccggaccagaaaattgatatt
ttctcggaccatggcaacccggaagcaccgcgcctgcttcatcagctgcagaacgatatc
cacaacctgacgccccttcgggaaatccgccagcaacaacgacaactggatgttcagcag
gatcattccctggcgttccaccaggcccacagcccacagcgggaagtggaaattctgcac
gatcagcttctcgccgccttcaacgtcgatcccacgctgcggccccgggacgtgatcgtg
atggtgcccgatatcaacgtgtacgcgccccacatacaggccgtattcggccgctaccag
ccgggccggaaacgccacattcccttcaccatttccgaccagggccagcgccaccacgag
ccggtgctgattgctctggaaaccctgatgtcactgccccgcagtcgttttgcggtgagt
gagatcatcagcctgctggaagtacccggcatacgggaccgcttcggtatcaatgaagac
gagatccccctggcccgtcgctgggtcgagggcgccaatatccgctggggtctgcacggc
cagcaccgggaaagcctggacctgcccgccgaactggaacgcaatacctggcaatccggt
ctgcgctcgatgctgctgggttatggcatgggcgacgatgagccctgggccggtgtggaa
cccttcggcgagatcggcggcctgcaggccagtcttgccggccgcctgaacgactttgtg
catcagctggaaaccctctggcaagcgcttcagacccatcgcacaccggacgaatgggaa
cacctgttctcagagatgctcgggcagttcttccacaaggtcgaaggcagcgacctgttg
ctgctgaaccgtttccgccgccagttggagcagtggctggaagacgcgctggcagcaggc
cttgaggaacagaccctgcccctgaacatcgtcaaggatgtgctgctggaggggctggat
gaaggcggcctgaaccagcgtttcctggccggcaaggtcaacttcgccaccctgatgccc
atgcgggcaatacccttccggaaagtgtgcctgctgggcatgaacgacggcgactatccc
cgctcccggccgccggtggatttcgatctcatggcccaggattaccgcccgggggaccgc
tcccgccgggaagacgatcgctacctgttcctggaagccctgttatccgcccgggcgcag
ctttacatcagttgggtaggccgcagcataaaggatgattcggaacggccgccgtcggtt
ctggtggggcagcttcaggatcatctggacagtctctggtctgtgtctgggcaacccgaa
accaaggtcatcgaggcactgacgacccaacacccgttgcagccgttcagccggagctat
ttcccgaaagccaacgggctggaggagggtggaaagggggaaaacagttcgccccgtccc
ctggccgaggtgttggaggcacgccggttattcacctacgagcgggaatggcgcagtgcc
catggtggtgaggctgccgcgcagacacagtcggcactaccttaccaggcgcccgaagag
cccatcagcctgaacgatctggcggctttcctgaaaaaacccatcgacaccttttaccag
cgccggctgcaggtgcgcttcgaggatgtcgaagacgacgacaccgacaacgagaatttc
gaactggacggcctggaccgctggcgcctggacaacgagctgatccaggatgggctattg
aaagccagcagcgacgaggaactgcacgatcggttgcaggcaactctggaccgcatggcg
cgacgcggcgacctgggtatgggcgtgaccgaacaccgcctgcgttccgagctggcgggg
cgcttgcccgatctgttcgagcgttaccagaacgcactggctgactggccggaagcggtt
gctgaaccgctgccctttgattaccggtttgaaagcgccctgggttcggtggaaatcgcg
gatctgatcgacaacctgcgctgcaatgcccagggagagctgtgccggctggtggtggcc
agttccagcctgctgaccggttcaggatccagcaagaaagtacgctatgccaacctgatg
cgggactggctgatccatctggcaggccagctcggcggtcaaccttttgagaccctggtt
ctgggcaaggaggagggacggaaattccgctttgctccattgcatccagagcgggccaga
ccgttgttcgaaacggtgctcagcggatggatggacgccaccacccgggcgctgcccatt
cactgcgaggccggctttgcctggatcaccagtttctacggcagcaaaaagtacgtcggt
gaccatgaacgagccatatcagaggcgcagcaggcctattccattgctctgaagcgggat
accggttacctgagaggggcctttgaaacaccggagctgctgatggccagcagtgaattc
gaagccctgttgcatcagctctacgtgccggtttgggaagccgagcaggacaaatcggct
gcagatcagatcggaggcctggaatga
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integrated database retrieval system
