Marinobacter adhaerens: HP15_588
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Entry
HP15_588 CDS
T01922
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mad
Marinobacter adhaerens
Pathway
mad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HP15_588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mad03019
]
HP15_588
03009 Ribosome biogenesis [BR:
mad03009
]
HP15_588
Enzymes [BR:
mad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HP15_588
Messenger RNA biogenesis [BR:
mad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HP15_588
Ribosome biogenesis [BR:
mad03009
]
Prokaryotic type
rRNA helicases
HP15_588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADP96352
UniProt:
E4PP40
LinkDB
All DBs
Position
complement(608488..610011)
Genome browser
AA seq
507 aa
AA seq
DB search
MSELSFAELGLDPAVLEAVSAVGYETPSPIQAQAIPALLAGNHLLGVAQTGTGKTAAFAL
PLLSRIDASVTDPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGGQDFYPQIKGL
RRGAQVIVGTPGRMLDHLRKGTLKLDSLKALVLDEADEMLRMGFIDDVEAILAKTPENCQ
RALFSATMPPQIKKVAQTYLRNATEVRIESETRTVERISQFVLPVYAERKLDALTRILEV
EPIDAAIIFVRTKAETTMLAEKLSARGHAVAPLSGDLNQRQREQTVEDLKRGKKDIIIAT
DVAARGLDVSRITHVINYDVPYDTEAYIHRVGRTGRAGREGKAILLVTPRERSWLRTLER
ATNSPMEAYELPSPVELKKMREQQFESQLLGFAEDKKLAKAMSLLDEIAERNDMDMAMVA
GALACWMEAAQPGSLPLEQPEALPTVSATPPRRDRKGGGGRPGENRKGPKGGFKKGGPKG
RGGPGGRGKPPGKGGSKPAGKRPPRQA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattgtcctttgccgaactggggctggatccagccgtacttgaagctgtgtcc
gccgttggctacgaaaccccgtcacccatccaggcccaggcgatccccgcgctgctggcc
ggtaaccatctgctgggcgttgcccagaccggaaccggtaagaccgcggcatttgcattg
cccctgctgagccggattgacgcctctgttaccgatccccagattctggttctggcccca
acacgggaacttgccatccaggtggcggaagcgtttaccacctacgccagcaagttccgg
aatttccacgttttgcccatttacggtggccaggacttttatccacagatcaagggtctg
cgtcgcggtgcccaggtgatcgtaggcacgccgggccggatgctcgaccacctgcgcaaa
ggcaccctgaaactggacagcctgaaagcgctggttcttgatgaagccgacgaaatgctg
cgtatgggctttatcgacgacgtggaagcgatcctggcgaagacgccggagaactgccaa
cgggcattgttctcggccaccatgccgccgcagatcaagaaagtggcccagacctacctg
cgcaacgccacagaagttcgcattgaaagcgaaacccgcacggtcgagcgtatctcccag
ttcgttctgccggtctatgctgagcgcaagctggatgccctgacccgcattctggaagtc
gagccgattgatgccgccattattttcgtgcgcaccaaagcggaaaccaccatgctggcc
gaaaagctttctgcacggggccacgcggtcgcgcccctgagcggtgacctgaaccaacgc
cagcgtgaacaaacggttgaagacctgaagcgcgggaagaaagacattatcattgccacc
gacgtggcagcacgcggtctggacgtgtcccgtatcacacacgtcatcaactacgacgtt
ccctacgacactgaagcgtacatccatcgggttggccgcactggtcgtgccggtcgcgaa
gggaaggcgatcctgctggtaacaccgcgcgagcgcagttggctgcgaacgcttgaacgc
gcaacaaactcgccgatggaagcttacgagttgccgtctcccgttgagctcaagaaaatg
agggaacagcagttcgagtcccaactgctgggctttgcggaagacaagaagttggcaaag
gcgatgtcgctgctggacgaaatcgccgagcgcaatgacatggacatggccatggtagcc
ggcgccctcgcatgctggatggaagcagctcagccaggctccctgcccctcgagcaacca
gaggccttgccaaccgtgtcggcaacacctccccgccgtgatcgtaaaggtggcggcggt
cgtccgggcgagaatcgcaagggcccgaaaggcggtttcaagaaaggtggcccgaagggt
cgtggcggccccggtggtcgaggcaaaccgcccggcaagggcggcagcaagcccgcaggc
aagcgcccgcctcgtcaggcttaa
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