KEGG   Mycobacterium adipatum: A7U43_12295
Entry
A7U43_12295       CDS       T09402                                 
Name
(GenBank) ribonuclease
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
madi  Mycobacterium adipatum
Pathway
madi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:madi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A7U43_12295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:madi03019]
    A7U43_12295
   03009 Ribosome biogenesis [BR:madi03009]
    A7U43_12295
Enzymes [BR:madi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     A7U43_12295
Messenger RNA biogenesis [BR:madi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A7U43_12295
Ribosome biogenesis [BR:madi03009]
 Prokaryotic type
  rRNA processing factors
   A7U43_12295
SSDB
Motif
Pfam: RNase_E_G IF2_N PCB_OB BUD22
Other DBs
NCBI-ProteinID: ANE79990
UniProt: A0A172UM95
LinkDB
Position
2584596..2587577
AA seq 993 aa
MAEDAPTQDLSESTQSSEELPAKLRVHSLARVLGTTSKRIVDALAELDGRARSPHSTVER
AQAEQVREVLNAEAAASAVEVPVTETPVEPAAADTPAEAETAVAPVAVVEEPESRLLLEA
PPAVEAAPDTAPSEAGTQPAPYLPLFVAPQPVPAIKARPVPAADETDDTDDDDDDADEAD
DTAGEDDQSDRPAARRRRRGRRGRGRGRGEQSAEDGEESEDADADTAEQSGTEDSEGDNE
NDEADSEDGDSDDTEDGAGSEAGSRRRRRRRRRKSGTPDSDEAVAPDDPPNTVVHERAPR
EKSAKAGRDPDEIQGISGSTRLEAKRQRRRDGRDAGRRRPPILSEAEFLARREAVERTMI
VRDKIRTEPPHEGARYTQIAVLEDGVVVEHFVTSAGSASLVGNIYLGIVQNVLPSMEAAF
VDIGRGRNGVLYAGEVNWEAAGLGGAQRKIEQALKPGDYVVVQVSKDPVGHKGARLTTQV
SLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPAGAGVIIRTASEGVKEDDIRS
DVNRLQERWTQIEANAAEVTKKKAGAAIALYEEPDVLVKVIRDLFNEDFTGLIVSGDDAW
NTISNYVNDVAPELVPRLTKYEPSAPDGPDVFAVHRIDEQLAKAMDRKVWLPSGGTLVID
RTEAMTVVDVNTGKFTGSGGNLEQTVTKNNLEAAEETVRQLRLRDIGGIIVIDFIDMVLE
SNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKKLGTGLIEAFSTTCTHCAGRGIH
LHADPVDSAAPSGNGGGRKSEPGSGNSRRSKRGKKAAKTEEVVADDIQMAKVPAHAAGEH
PMFKAMAAGLHGSEEDVPDEDAPAEESIVDGADTEDAEDIEEATSDAAFDESDDDESDED
DLDLDDDDDEEDDDEIEVLDDDSDDEDSDDEVSDDEDSDDEDSDDEDSDDEDSDDEDSED
EDAEAVTYQPPVAAPRGRGRRRAAARPAGPPAG
NT seq 2982 nt   +upstreamnt  +downstreamnt
gtggccgaagatgcccctacccaagacctgtcggaaagcacccagagcagcgaggaactg
ccggcgaaactgagagttcattcgctggcccgcgtgctgggcaccaccagcaagcgcatc
gtcgacgctctcgccgagctggacggtcgggcccgcagcccgcactcgacggtcgagcgg
gcgcaagccgaacaggtccgcgaggtgctgaacgccgaggccgccgcgtccgcggtcgag
gtcccggtgaccgagacgcccgtcgaacccgccgccgccgacacccccgccgaggcggag
accgctgtcgcacccgtcgccgtcgtggaagagcccgaatcccgtctgctgctggaggcg
ccccccgctgtggaggcggccccggacaccgcgccgagcgaggccggcacccagccggct
ccctacctgccgctgttcgtcgcgccccagccggtgcctgccatcaaggcgcgccccgtg
cccgccgccgacgagaccgatgacaccgacgacgatgacgacgacgccgacgaggccgac
gacaccgccggtgaggacgaccagtcggaccggcccgccgcgcggcgccgccgccgcggc
cgtcggggccgcggtcgtggtcgcggggagcagagcgccgaggacggcgaggagtccgag
gacgcggatgccgacaccgccgagcagtccggtaccgaggattccgagggcgacaacgag
aacgacgaggccgactccgaggacggcgattccgacgacaccgaggacggcgcgggctcg
gaggcgggcagccgccgtcgccgccgtcgccgtcgtcgcaagtcgggtaccccggattcc
gacgaagccgtcgcccccgacgatccgcccaacaccgtcgtgcacgagcgagcgccgcgg
gagaagtcggccaaggccggccgcgacccggacgagatccagggcatctccgggtccacc
cggttggaggccaagcgccagcgccgccgcgacggccgggacgccgggcgccgtcgaccg
ccgatcctgagtgaggccgaattcctggcccgccgggaagcggtcgagcgcaccatgatc
gtgcgggacaagatccgcaccgaaccgccgcacgagggcgcccgctacacccagatcgcg
gtcctcgaagacggcgtcgtggtcgagcatttcgtgacgtcggcggggtcggcatcgctg
gtcggcaacatctacctcggcatcgtgcagaacgtgctgccctcgatggaggccgcgttc
gtcgatatcggccgcggccgcaacggtgtgctctacgccggcgaggtcaactgggaagcg
gccggtctcggcggcgcccagcgcaagatcgaacaggcactcaagcccggcgattacgtc
gtcgtgcaggtcagcaaggacccggtcggccacaagggcgcccggctcaccacgcaggtc
tcactggccggccgctacctcgtgtacgtgccgggtgcgtcctcgaccggaatcagccgc
aagctgcccgacaccgaacggcagcgcctcaaggagatcctgcgcgaggttgttccggcc
ggtgccggcgtgatcatccggaccgcgtccgagggcgtcaaggaagacgacatccgctcg
gatgtgaaccggctgcaggagcgctggacacagatcgaggccaacgccgccgaggtcacc
aagaagaaggccggcgccgcgatcgcgctctacgaagagcccgacgtactggtcaaggtg
atccgcgatctgttcaacgaggacttcaccggcctcatcgtgtccggcgacgacgcctgg
aacaccatcagcaactacgtgaatgacgttgcgccggagcttgttccgcgcctgacgaaa
tacgagccgagtgctccggacggccccgacgtgttcgccgtgcaccgcatcgacgaacag
ttggccaaggcgatggaccgcaaggtgtggctgccctcgggtggcaccctggtcatcgac
cgcaccgaggcgatgaccgtcgtcgacgtcaacaccggcaagttcaccggttccggcggc
aacctcgagcagacggtgaccaagaacaatctcgaagccgccgaggagacggtgcgccag
ctgcggttgcgcgatatcggcgggatcatcgtcatcgacttcatcgatatggtgctggag
tccaaccgcgacctcgtgctgcggaggctgaccgaggcgctggcccgggaccgcacccgt
caccaggtgtccgaggtgacctcgctcggcctggtgcagctgacccgcaagaagctcggc
accggcctgatcgaggccttctccacgacctgcacgcactgcgcgggccgcggcatccat
ctgcacgccgatccggtggactccgcggcaccgtccgggaacggcggcggccgcaaatcc
gagccgggctccggcaacagccgacgcagcaagcgtggcaagaaggcggccaagaccgaa
gaggtggtggccgacgacatccagatggccaaggtgccggcgcacgcggccggtgaacac
ccgatgttcaaggccatggcggccggcctacacggatccgaggaggacgttcccgacgag
gacgcacccgccgaggagtcgatcgtggacggcgccgacaccgaggacgccgaggacatc
gaggaagcgacctccgacgccgctttcgacgagtccgatgatgacgagtccgacgaggat
gacctggacctcgatgacgacgatgacgaagaggacgacgacgagatcgaggtcctcgac
gacgactccgatgacgaggactccgatgacgaggtctccgatgacgaggactccgatgac
gaggactccgatgacgaggactccgacgacgaggactccgacgacgaggactccgaggac
gaggacgccgaagcggtcacctaccagcccccggtcgcggcccccaggggccggggtcgt
cggcgggcggccgcccgcccggcaggcccgccggccggctga

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