Mycobacterium adipatum: A7U43_20095
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Entry
A7U43_20095 CDS
T09402
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
madi
Mycobacterium adipatum
Pathway
madi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
madi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A7U43_20095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
madi03400
]
A7U43_20095
Enzymes [BR:
madi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A7U43_20095
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A7U43_20095
DNA repair and recombination proteins [BR:
madi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A7U43_20095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Spt4
NFACT_N
TackOD1
Auto_anti-p27
HpcH_HpaI
DUF5108
Motif
Other DBs
NCBI-ProteinID:
ANE81281
UniProt:
A0A172UQB6
LinkDB
All DBs
Position
complement(4237670..4238539)
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AA seq
289 aa
AA seq
DB search
MPELPEVEVVRRGLAAHVLDRTITDVEVLHPRASRRHLAGSIDLAARLRGNTITGTGRRG
KYLWLTMSSGDALVVHLGMSGQMLLGPVPNPSHLRITTMLDNGMTMNFVDQRTFGGWMLT
DLVTIDGTELPEPVAHIARDPLDPDFNRDGVVTVLRRKHSEIKRQLLDQTVVSGIGNIYA
DEALWRAKINGARLASALTKRQLAEVLDAAKAVMTGALSQGGTSFDSLYVNVNGESGYFE
RSLEAYGRVDQACRRCGAVMQRDKFMNRSSYYCPKCQPRPRIRRVAIAD
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttcctgaggtcgaggtggtgcggcggggtttggccgcgcacgtcctggac
cgcaccatcaccgacgtcgaggtactgcatccgcgtgcgtctcgccggcacctggccggt
tcgatcgaccttgccgcccggctgcgcggcaacaccatcaccggcaccggccggcgcgga
aaatacctgtggctcaccatgtccagtggtgacgcgctcgtcgtgcacctgggcatgagc
gggcagatgctgctcgggccggtgcccaacccgtcacatctgcgcatcaccaccatgctc
gacaacggcatgacgatgaacttcgtcgaccagcggacattcgggggttggatgctcacc
gatctggtgaccatcgacggcaccgagctgcccgaacccgtcgcgcatatcgcacgtgac
ccgctggaccccgatttcaaccgcgacggcgtggtgacggtgttgcggcgcaagcattcc
gagatcaagcgccaactgctcgaccagacggtggtctccgggatcggcaacatctacgcc
gacgaggcgctctggcgggccaagatcaacggcgcccggttggcgtcggcgttgaccaag
cggcagctcgccgaggtgctcgacgccgccaaagcggtgatgaccggggcgctgagccag
ggcggcacctccttcgactcgctgtatgtcaacgtcaacggcgaatccgggtacttcgag
cgctcgctggaggcctacgggcgcgtcgatcaggcgtgccgacggtgtggtgcggtgatg
cagcgagacaagttcatgaaccgctcgtcctactactgcccgaaatgccaaccgcggccg
cgtattcggcgcgtggctatcgctgactga
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integrated database retrieval system
