Mycobacterium adipatum: A7U43_24505
Help
Entry
A7U43_24505 CDS
T09402
Name
(GenBank) DNA lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
madi
Mycobacterium adipatum
Pathway
madi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
madi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A7U43_24505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
madi03400
]
A7U43_24505
Enzymes [BR:
madi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A7U43_24505
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A7U43_24505
DNA repair and recombination proteins [BR:
madi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A7U43_24505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Ribosomal_S13
NFACT_N
Zn_ribbon_TFIIB
DUF7577
Motif
Other DBs
NCBI-ProteinID:
ANE81998
UniProt:
A0A172USN1
LinkDB
All DBs
Position
complement(5156160..5157014)
Genome browser
AA seq
284 aa
AA seq
DB search
MPELPEVEALADHLRRHAVGTVIGRVDIAALSVLKTFDPPVTALHGAEVTGAARWGKYLG
LQAGELYLITHLSRAGWLRWSDKLAPTPLKPGKGPIALRVHLGDGHGFDLTEAGTQKRLA
VWVVRNPMDVPQIAGLGPDALELDVDGLHQALAGHGGRIKTVLTDQKVIAGIGNAYSDEI
LHVARLSPFATADKLSDAQLADLHDAMSSVLTDAVTRSVGQQAATLKGEKRSGLRVHART
GLPCPVCGDTVAEVSFVDKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgcccgaagtggaggcgctcgccgatcacctgcgccggcacgccgtcggc
acggtgatcggcagggttgacatcgccgccctgtcggtactgaagaccttcgacccgccg
gtgaccgccctgcacggtgccgaggtgaccggtgccgctcggtggggcaaataccttggc
ctgcaggccggtgagctgtacctgatcacccacctgtcgcgggccggctggctgcgctgg
tcggacaagctggccccgaccccgctcaaaccgggtaagggccccatcgcgttgcgcgtg
catctgggtgacgggcacggtttcgatctgaccgaggccggcacccagaagcggttggcg
gtgtgggtggtgagaaacccgatggacgtgccgcagatcgccggtctcggacccgatgcg
ctggaactggatgtcgacgggctgcatcaggcgctggccggtcacggtgggcgcatcaag
accgttctgaccgaccagaaggtgatcgccggtatcgggaatgcctacagcgacgagatc
ctgcatgtggcgaggctgtcgccgttcgcgaccgccgacaagctctccgatgcgcagctg
gccgatctgcacgatgcgatgtcctcggtgctcaccgacgcggtgacgcgttcggtgggc
cagcaggcggcgaccctgaaaggggagaagcgctccgggctgcgggtgcacgcccgcacc
gggctgccgtgcccggtgtgcggggacaccgtcgccgaggtgtccttcgtcgacaagtcg
ttccagtactgcccgacctgtcagaccggcggcaaagtgctcgcggatcgcagaatgtcg
cggttgctcaagtag
DBGET
integrated database retrieval system
