Mya arenaria (softshell): 128202682
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Entry
128202682 CDS
T09995
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea03013
Nucleocytoplasmic transport
maea03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128202682
03015 mRNA surveillance pathway
128202682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128202682
Enzymes [BR:
maea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128202682
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128202682
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
128202682
NCBI-ProteinID:
XP_052759690
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All DBs
Position
9:complement(12444194..12465971)
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AA seq
516 aa
AA seq
DB search
MADDWGAIVDEQEKNLTQKVGGLNLAGASGGDKPTTSTSSTTTTTAGAQATGVQATGAQG
AEGGVKGATGGAGDTGATAKAGEEEEHAVTKEDESLLHKLLHSKLVSTKADLEVLQKDPN
SPLYSVKSFEALHLKPELMKGVYEMGFNAPSKIQETALPVLLADPPTNMIAQSQSGTGKT
AAFVLTMLSRVDPNLQHTQCLCLAPTYELALQIGGVTEKMAKNMVNVKIGYAVKGERIAR
GQRSLDHILIGTPGTVSDWCLKYKSVDPKKLTVFVLDEADVMIATQGHQDQSIRIQRQLS
KTCQMLLFSATYEDDVMKFAQAVIPNNPVVIKLRRDEESLNNIRQFYVQCRDQEEKFQAL
GNIYGAISIGQSMIFCATRRTAHWLSEKMTKDGHAVALLSGDLDIAQRAAIINRFRDGKE
KVLITTNVSARGIDVEMVTVVVNFDMPVLQETKQADCETYLHRIGRTGRFGKAGIAINMI
DSNKSLQVMKAIERHFNRTIELLDTDDIEAVERIST
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgactggggagccattgttgatgaacaggaaaagaaccttactcaaaaggtt
ggcggtctgaatcttgctggtgccagcggcggtgacaagcccaccacatcaacatcatca
acaacaacaacaacagcaggtgcccaggcaacaggagttcaggcaacaggagcccagggg
gctgagggaggagtcaaaggggcaactggaggggcaggggatacaggggctacagctaaa
gctggggaggaggaagaacatgcggtgacaaaagaggatgaatcactattacacaagctg
cttcactccaagcttgtctccacaaaagcagatctggaggtgttacaaaaagatcccaac
tctccactctactcagtgaagtcatttgaggccctccatctgaagccagaactgatgaag
ggtgtatatgaaatggggttcaacgcaccttcaaaaatacaggaaacagcattaccagtc
ttgcttgctgacccgccaaccaacatgatagctcaaagtcagagtggtacagggaagacc
gcagccttcgtccttacaatgctcagtcgggtagaccctaatctccaacatacacagtgc
ttgtgcctggcgcccacctacgagctggctctacagataggcggcgtaacagagaagatg
gccaaaaatatggttaacgttaaaataggctacgctgtgaaaggggaaagaattgctcgt
ggtcagaggagcctggaccacatcttgataggcacgcccggcactgtgtctgactggtgc
ctcaagtataaaagcgtggacccaaagaaactgacagtattcgtccttgatgaagcagat
gttatgatagccacacagggtcatcaggaccagagtatacgcatacagaggcagctgtct
aaaacatgtcaaatgttactattctctgccacttacgaagacgatgtaatgaaatttgcc
caggcagtaatcccaaataatcctgtcgtaattaagctacgccgagacgaggaaagcctc
aataacatccgacagttctatgtgcaatgtcgagaccaggaagagaagtttcaagcgctg
ggcaacatctatggcgcgatctctatcgggcagtcaatgattttctgtgcaacacggcgg
acagcccactggttatcagaaaagatgacaaaggacggtcacgcggtggcgttattatca
ggggatctggacattgcacagcgggcggcaatcatcaacagattcagggatgggaaggag
aaagtcctcatcacaacaaatgtatctgccagaggtatagacgttgagatggtaacagtg
gttgtaaatttcgacatgcccgtgttacaagagacgaaacaagccgattgcgagacatat
ttgcacagaatcggccggacaggtcggtttggaaaggctggaatcgccatcaacatgatc
gactcgaacaaatccctccaagtcatgaaggcaatagaacgacatttcaatcgtaccata
gaactgcttgatacagatgatattgaagcagttgaaaggattagcacctaa
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