Mya arenaria (softshell): 128202746
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Entry
128202746 CDS
T09995
Name
(RefSeq) ubiquitin conjugation factor E4 B-like
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea04120
Ubiquitin mediated proteolysis
maea04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128202746
04120 Ubiquitin mediated proteolysis
128202746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maea04121
]
128202746
Enzymes [BR:
maea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128202746
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
U-box type E3
128202746
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
MtlR
Motif
Other DBs
NCBI-GeneID:
128202746
NCBI-ProteinID:
XP_052759809
LinkDB
All DBs
Position
9:933617..971163
Genome browser
AA seq
1133 aa
AA seq
DB search
MNELTQDEVRRRRLARLQGNGGSSSSPPAQSSPVAPSIENAQANTASTPAQDEAVNPPSL
VSEASNSSSSSVMSTPSTRTPPGSLRVDSTPQLHTPSSEMDCSEKQSQSQMDVDSGIETM
EVDEVEMKHDVKRRRDASIGSEASEDQMINSICRVFQVSFKEPSPAAIHLPELEETLSQG
ECVDKKEVINQTVMEVLFKIKDSDTNPVLQLKPITPDISPMKQYGSSPMGGSPMMPTPDT
PRREFTSKMPQPQCKEVEMVNYLLDSYERVAGEERLAPKRASVPPMSDMLASARHQCACH
TSLVLQGVLTKPRSLAASSLLLPYLLSHNLPRGFITELVFSTHRDKDSFRKVFEPLLQSL
HRYVQTLSLDTDDYREVVAVLSELVEIKCGPARPVCNLMVELSNWLPDVFSQAGGMEVAR
LSFLGPFFALGVFAEDNTKVVEKHFSGHQLTPDNVRLVHQSLQHRMQYLREELYKILHAV
LVNAETREAAMTYIATALERNGKKSQIVVNNKHVAGDGFMLNLLSVLQKLAMKVTLDKVD
PYYMFHPQCRVKLRSEARLKLSSQEADAYTDKLRSDPVPPWQEPKFPTECFTLTVNAHHL
SILPVVQRHQRCVRAIRDLSRVVEELENSEPIWKHFPQAARNRQIVKKYKQQFQRLQKSK
LCAEAAIMDESLLRRCLQFYSVLAEYLLAIADPVNKGTILPLPAEVSPLFQALPEFNLED
VAEFTLFVAQAMPQALEDPCTDRLLQLLIVFVCSPGYVNNPYLLAKLVEVMFYFNPAVQP
RMDKIHERLLLHDLSREFLAPALMQFYTDIESTGSSNEFYDKFSIRYHISIIFKAMWGIH
SHQLKIIEEADKGKQFVKFVNMLMNDTTFLLDESLDCLKRIHEVQELMTSDEWNKKSQEQ
QQTEQRQLATDEKQCRSYLTLATETVDMFHYLTNKIQKPFLIPELADRLAAMLNFNLQQL
CGSKCKNLKVRNPEKYGWEPKKLLDYLTDIYLHLDCPEFLEAIANDERSYRKELFDDAIV
RMRRACIKVETDIEKFRNIQEKVERIVVQKAQDERDYGEIPDEFRDALMDTLMKDPVQLP
SGNVVDRPVIMRHLLNSQTDPFNRQPCREDDLIPREDIKTRIEDWINKSKAPK
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaattaactcaagacgaggtacggcgtaggaggttggcgaggcttcagggcaat
ggagggtcatcgtcttcaccccccgctcagtcaagtcctgttgccccttccatagagaat
gcacaagctaacactgcttcgacaccagctcaggatgaggctgtgaaccctcccagcctg
gtgagtgaggcatctaacagttcttccagctcagtcatgtcaacaccgagcaccaggacc
cctccagggtcattaagagttgacagcacaccgcaattgcatacaccttcttctgaaatg
gactgctcagagaaacaaagccagtctcagatggatgtagattctggcattgagacaatg
gaggtagatgaagtggagatgaagcatgatgtcaaacgtaggagggatgccagtattggc
tctgaggcaagtgaggatcagatgataaactctatctgccgagtgttccaagtgtcgttc
aaggaacccagccctgccgctatacaccttcctgaacttgaagagacgctctcacaagga
gagtgtgtggacaagaaagaagtgattaaccagactgtgatggaagtgctgttcaaaatc
aaggactcagacacaaaccctgtactccagcttaagcccattacaccagatatttctcct
atgaaacagtatggctctagtcctatgggaggaagccctatgatgccgacaccagacaca
ccccgaagggaattcaccagtaagatgccccagccccagtgtaaggaggtggaaatggtc
aactatctccttgacagttatgagagggtcgcgggagaagagagacttgctcctaagagg
gcgagtgttccacccatgagtgacatgttggcgtcggccagacaccagtgtgcctgtcat
acttcgcttgttctccagggggtgcttactaaacctaggtcattagcagccagttcccta
ttgttaccatatcttctctcacacaacctgccccggggtttcatcacagagttggtcttc
agcacgcacagggataaggactcattcaggaaggtgtttgagccattactacagtcatta
catcgatacgtacagacgttatccctggacactgatgactatcgcgaggtggtggcagtg
ttgtcggagcttgtagagatcaaatgtgggccagccaggcctgtttgtaacctgatggtt
gaactttctaactggctaccagatgtgttcagccaggctggcggtatggaggtggccagg
ttgtcattcctgggaccattcttcgcacttggtgtgtttgccgaggataatacaaaggtt
gtggagaagcacttttccggtcatcagctgaccccagacaatgtacggctggtccatcag
tcactacaacaccggatgcagtatctcagggaagagttatataagatccttcacgcagtg
ttagttaatgcagaaacacgagaagctgccatgacgtacatagccacggccttggagaga
aacggcaagaaatcacaaattgtggtaaacaacaaacatgtagcgggagatggattcatg
ttaaacctgctcagtgtgctgcagaagcttgctatgaaagtcactctcgataaggtggac
ccttactacatgtttcacccgcagtgccgtgtaaagctccgctcagaagctcgactcaaa
ctctcatctcaggaagccgatgcttacacggacaagctcaggtcagaccctgttccacct
tggcaagagccaaaattcccgaccgagtgtttcaccctgactgtcaatgcccaccaccta
tcaatcctacccgtggtacagcgacaccagcgctgcgtacgggcgatacgtgacctctcc
cgggtcgttgaagagcttgagaattctgagcccatttggaaacactttccgcaggcagct
cgcaatcgacagattgtgaagaaatataaacaacagttccagaggttacagaagagcaag
ctgtgtgccgaggctgccattatggatgaatctttgttacgtagatgcttacagttttac
agcgttctggcagagtacctgctggcgattgctgatcctgtgaataagggaactatatta
ccactgccagctgaagtttcgcccttgttccaagcactgccagagtttaacctggaagat
gtagcggaatttacgctctttgttgctcaagctatgccccaggcactagaagacccctgt
acagatagactactgcagctgttgattgtatttgtatgcagtcctggctatgttaacaac
ccatatctattggccaaactggtcgaagtcatgttttacttcaatccggcagtacagccg
agaatggacaagatccatgagcgacttctcctccatgacctgtccagggagttcctggcc
ccagctctcatgcagttctacacagacattgagtctactgggtcaagcaacgagttttat
gacaagttcagcatacgctaccacattagtatcatcttcaaggccatgtggggcatacac
tcgcatcagctcaagatcatcgaagaagcagacaaggggaagcagtttgtgaagtttgtg
aacatgttgatgaacgacaccacatttctgcttgacgaaagtcttgactgcctcaagcga
atacacgaggtacaggaactcatgacttctgacgagtggaacaagaaatctcaagagcag
cagcagacagagcagcgacagctggcaacagacgagaaacagtgtcggtcgtacctgacc
ctggccactgagacagtagatatgttccattacctgaccaacaagatacagaaacccttt
ctcataccagaattggctgacagacttgccgccatgttgaattttaacctacagcagctc
tgcggttccaagtgtaagaatcttaaggtccgaaacccggagaaatacggctgggagcct
aagaagctgctggattatctcacagacatctaccttcaccttgactgcccagagttttta
gaggctattgctaatgatgagagatcctatcgcaaggagctgtttgatgacgctattgtg
cgtatgcggcgagcgtgcatcaaggtcgagacagacatcgagaaattccggaacattcaa
gaaaaggttgagaggattgtcgtacaaaaagctcaggacgagagagattatggggagatt
ccagatgagttcagggatgctttgatggacacactaatgaaggacccagtccaactgcca
agcggtaatgtggtggaccgccccgtgattatgcgccatctgctcaactctcagactgac
ccgttcaaccgacagccatgtagagaagatgatctcattcccagagaagatatcaagacg
aggattgaagattggattaataaatcaaaggcgcccaagtga
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