Mya arenaria (softshell): 128202839
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Entry
128202839 CDS
T09995
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea00061
Fatty acid biosynthesis
maea00071
Fatty acid degradation
maea01100
Metabolic pathways
maea01212
Fatty acid metabolism
maea04146
Peroxisome
Module
maea_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
128202839
00071 Fatty acid degradation
128202839
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128202839
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
maea01004
]
128202839
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
maea04147
]
128202839
Enzymes [BR:
maea01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
128202839
Lipid biosynthesis proteins [BR:
maea01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
128202839
Exosome [BR:
maea04147
]
Exosomal proteins
Exosomal proteins of breast milk
128202839
Exosomal proteins of breast cancer cells
128202839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
PBP_sp32
Motif
Other DBs
NCBI-GeneID:
128202839
NCBI-ProteinID:
XP_052759956
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All DBs
Position
2:complement(67736051..67793214)
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AA seq
678 aa
AA seq
DB search
MDDTVLKVLGTGTVVATAAAYWLTRSPPSFNPAVDFTEQTYDALGPEKAKISKQAEKGVT
VAYDEEDVRTLHDAFKKGARISNNGPCLGWKPSPTEPYNWISYNDVLTKGSRVGAGLIAM
GQAASNSTHIGIYSQNRVEYFISEQGCYMYSMCIVPLYDTLGIEACNYIINQAELSLIIC
DKNEKVTNLLGRMSETPNLRILVVMETITDDVKALAQKHSIDLIQYSDLEKKGEEAPQDL
KPSGPDDLAVVCYTSGTTGLPKGAMLTHENCLAPTLACTNLFDSNNLIVKPDDVLISYLP
LAHSYERLCEACMYSCGGKIGFFQGDVRKLMDDIKELKPTVFPSVPRLLNRVFDKVMAGA
SVSAIKSKMLNMALASKEAEIKSGIIRKNSWWDKLVFSKIQESLGGRVRLLTTGSAPLSP
KILMFLRCCVGAPVLEGYGQTECGAICTLQVPGDGQIGNVGPPLRCNYIKLVDVPDMNYN
ASDDKGEVCIKGPNVFKGYIKDPVKTQEAIDEDGWLHTGDVGQWMDNGCLKIIDRKKNIF
KLAQGEYIAPEKIENVYVRSPHVAQVYIHGDSLKSSLIAVIVPDPDTFPAFARDKLGLSG
DMAELCNNEQVKKVIMEDITSVGKKAGLASFEQAKAIHLYPELFSVENELLTPTFKSKRN
TLKVFFKKEIEEMYKDLP
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggatgacactgtattgaaggtgctgggaaccgggacggtagttgccacggcagctgcc
tactggctcacacgtagtccaccaagcttcaacccggcagttgacttcactgaacagaca
tacgatgccttgggtccagagaaagcaaaaatcagcaagcaggcagaaaaaggggtgact
gtggcttatgatgaagaagatgtgcgcacgcttcatgatgccttcaagaagggtgcaaga
atctccaacaatggcccgtgcttgggatggaagccctccccaacagagccctacaactgg
atctcatataacgatgtgctgacaaagggtagtagggtaggtgcaggcttgatagccatg
ggacaggcggcatctaactccacacacattggcatctactcacagaacagagtagagtac
tttatatcggagcagggctgctatatgtactcgatgtgcattgttccattatacgatacc
ctgggtattgaagcctgcaactacatcattaatcaggctgagttaagcctgataatctgt
gacaagaatgagaaggttaccaatcttcttggtcggatgtctgaaaccccaaacctacgc
attcttgttgtcatggaaactatcacagatgatgtgaaggccctagcacaaaaacacagc
attgaccttatacaatactcagacctagagaaaaagggcgaggaagccccacaggacctt
aagccaagtggccctgatgacctggcggttgtatgttacacgagcggaaccacggggctg
cccaagggagccatgttgacacacgagaactgcctcgctcccacactagcctgtactaac
ctctttgatagcaacaacttaattgtgaagccagatgatgtgttgatatcctatctaccc
ctagctcactcgtatgaaaggttgtgtgaggcatgcatgtactcatgtggaggaaagatt
gggttcttccaaggagacgtccgtaaactcatggacgatatcaaggagttaaagccgacc
gtgtttccgtctgtaccgagattgctcaacagagtctttgataaggtaatggcaggggcc
agtgtcagtgccataaagtccaagatgttgaatatggcactagcatctaaagaagctgag
attaagagtggtatcatccgtaagaactcgtggtgggataagctcgtgttcagtaagatc
caggagagcctcggtgggcgtgtgcgccttctcaccactggctcagcccccctctcaccc
aaaatactcatgttcctacgctgctgtgtgggcgcccctgtgttggaggggtacggacag
acagagtgtggtgctatctgtactctgcaggtccccggagacggacagataggcaatgtt
ggacctcctctgaggtgtaactacatcaagctggtggatgtgcctgacatgaactacaat
gcctcagatgacaagggagaggtctgtatcaaaggaccaaatgtgtttaaaggctatata
aaggatccagtgaagacacaggaggccatcgacgaggatggatggctccacaccggcgac
gttggacagtggatggataatggttgtctaaagatcatcgaccgtaagaagaacatcttc
aagctggcgcagggagagtatatagctccagagaaaattgagaatgtgtacgtacgatcc
ccacacgttgctcaggtctacattcatggtgacagccttaagtcaagcctcatagctgtc
atagtgccagatccagacaccttcccggcattcgccagggacaaactcggcctgtctggg
gacatggcggagctgtgcaataatgagcaagtgaagaaggtgatcatggaggacatcaca
tcagtcggcaagaaggcaggactagcttcatttgaacaggccaaagcaattcacctctat
cccgagttgttttcggttgagaatgaactccttaccccgactttcaagtccaagaggaat
acactgaaggtcttctttaaaaaggagattgaagaaatgtataaagatctaccctag
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