Mya arenaria (softshell): 128203215
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Entry
128203215 CDS
T09995
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase-like
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
maea03009
]
128203215
Enzymes [BR:
maea01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
128203215
Ribosome biogenesis [BR:
maea03009
]
Eukaryotic type
Other ribosome biogenesis factors
128203215
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_fdxn-like
NSUN5_N
FtsJ
Methyltransf_25
ASPP2-like_RA
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
128203215
NCBI-ProteinID:
XP_052760482
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All DBs
Position
9:complement(2900062..2909800)
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AA seq
493 aa
AA seq
DB search
MDLYVDASKIILAVLNKTGSIKTLVYKSQYQNKKSLYAIVCEVIKHRQQLENVGRKCENF
GKDKRLAGQPHPFLLHVLLFEHILGKGVRGKFKALVERHKNSIHVACERLKVKAGVDSVK
QLFSQSCSDTGSSGELPKYVRVNTIKISMADVEKELGKTFTFISRPNIGFSDIPSLLTPH
TVLRDPHIPNLLVFHPRTDLHSHRLYKTGAIILQDKASCTPAHVLSPPPGSTVIDCCAAP
GNKTTHLAAIMGNTGKVFAFDKDKKRVEILKKMVTTAGATCVTPVFKDFLSVDPTDSSYA
RVEYILVDPSCSGSGMVNRVSMKSDEDSYPKERLNQLSKFQISILKHALSFPNVKKIVYS
TCSIHEEENEQVVEEVYSHVSEIFEIDHVMPDWPMRGLVTYEHGEKCVRMSHDLTLTNGF
FVSSFSRKINKKRKHEEDGCHSEKNRPLKVKVKNTRSSKVVHKSNVRKQQGPSIETHKHL
RATTDWKIDIIAV
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggatctttatgtagacgcgagtaaaataattttagcagttttaaacaaaacgggctca
ataaaaaccttagtttacaaatcccagtaccagaacaagaaatcattgtatgccattgtc
tgcgaggttatcaaacacagacaacagctggaaaatgtgggcagaaaatgtgaaaacttt
ggcaaagacaagagacttgctgggcagccgcatccattcttgttacatgtacttctgttt
gaacacatccttgggaaaggtgtgaggggcaagttcaaggcgttggtggaacggcataag
aactcaatacatgtggcctgtgaaaggttaaaggtcaaggccggagttgatagcgtgaag
cagctgttctctcaatcctgcagtgacactggcagttcaggtgaactacccaagtacgtc
agggtgaataccatcaagatttcaatggctgatgttgaaaaagaacttggaaagacattc
accttcatctcaagaccaaatattggcttttctgacataccaagtctacttacaccccac
actgtgttaagggacccccacatccccaatctgctagtgttccatccaagaacagaccta
cattcacaccggctctacaagactggggccattatacttcaggacaaggctagctgtacc
cctgcgcatgtgttatccccacccccaggatctacagtgatagactgctgtgctgctcct
gggaacaaaaccacccacctagctgccatcatgggcaacacagggaaagtgtttgctttt
gataaggacaagaagagagtggaaatcttaaaaaagatggtaacaactgctggagccact
tgtgttacgcccgtgtttaaagacttcctctctgttgaccctacagacagcagctatgca
cgggtggagtacatccttgtagacccctcatgttctggatcaggaatggtgaatagagtg
tctatgaaaagtgacgaggattcttaccccaaggagaggttaaatcagctttcaaagttc
cagatctctattttaaaacatgcattgagctttcctaatgttaagaaaattgtgtattca
acctgttctattcacgaagaagaaaacgaacaagttgttgaagaagtgtactcacatgtg
agtgagattttcgaaattgatcatgttatgcctgattggccaatgagaggtcttgttaca
tatgagcatggagaaaaatgtgtaaggatgtcacatgaccttacactgaccaatgggttc
tttgtttctagcttttcaagaaagataaacaaaaaacggaagcatgaagaggatggctgt
cacagtgagaagaacagacctcttaaagtaaaagtaaagaatacacgctcatcaaaagta
gtacataaatcaaatgtcagaaagcagcagggaccctcaatagaaacgcataaacactta
agagcgactaccgattggaaaattgatatcattgctgtataa
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