Mya arenaria (softshell): 128203299
Help
Entry
128203299 CDS
T09995
Name
(RefSeq) rootletin-like isoform X1
KO
K16469
rootletin
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
maea03037
]
128203299
Cilium and associated proteins [BR:
maea03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128203299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
128203299
NCBI-ProteinID:
XP_052760603
LinkDB
All DBs
Position
9:complement(57969126..58060511)
Genome browser
AA seq
2482 aa
AA seq
DB search
MESDKSESDSEFSGQGHDDRNKDGTDDDIQEEIEYEDSESVSVSEKQDIEGKDIGDENSG
GDFQDTADTTVKGEGQIEETEDKIQQEDQDESLADTKEDVTDVTQNTHDTTIQSTDPVMS
DDDDSDRLEQIQTDVHLLKSNVDEGISDLSEITVQAPTPDRDMIEEEEGDYSYKDDFEED
KHASVSDDNEFNISVDNYMEFPVASRSWSGEVADPVGKTLETDSVVSDIFEPRASTRMDE
TLQPAYSRYDDLQSKYTRPRHSPHQPEDLTLTYLPARGIRSYAPFLMSSPLSEFYREDNK
LEDSVLRDKDTEDYEIRGEGDRYEKIPARIREIITKNLATDERKPLAMSTPTPQQLKEEN
RLLSSELNRVEDLLAASRAERDELGIKYNALSEKVLSLDGSIAAQSENYMENISRVSSSS
RTYQLRARWSYNKDGENDESRESTLEQSLRGDSGAEGGDGASRPLLQQNIDLRRKLEEEH
SSYKRKLQAYQDGQARQAQLVQKLQAKLLQYKRKCTEFEDNIRYKELLSKDTERKLQSTS
DRLDGTEARLRMAESEHNMDLEQALIKLEEEQQRSSSLAHVNSMLREQLDQATAANQSLT
SDIHKLTGDWQKAREELDIKENEWRDEEQSFNEYFSAEHGRLLSLWRAVVAFRRNFSELK
TATERDLSHTRSDVTKAARSMHTACLNLNANMRNTETQTQVSSDRERGERASLESQLRDS
RREVAELQARYDAHSAELNARVNELTMSNEKLKIQLEEKDKTIQNLRRAVEHLEIKSGER
TFAEMQESDMSRAIRDETESLHNALRSIAESVLNDAADDEPSRDLGETALSRARSTSPLA
RGRSPDMRARSKSPMARSRSPAFADATFSAVQAALNKRQLQLAELRAKLAAQKDHNAAQK
KMMDDLDNEKRRLELQILNLKEDLDISRRDREDTSRDRDRVKNALGQTSSEKNTLEKVRQ
ELNDQIEQLNSENTKLQAANTELQRQRDNLEDEKDDNVKDKERQIKENERCQRIIEQQEH
KNSGLKEELVATKEALNRALLDKEVLDQQRLEVSEALDKAEMVKTELEGELHKSRSEEEA
LKDALAKMQALNEGLGFDKIELNKIIMQMEAEKAAVYGEKHALEQERTGIREELVRVEQE
KMDLDTEKAGLNQTLELSEMTRQQLEEEIGMLNREKADVTEQLNSISRQKQALGEELVSM
RKDCERLTNQLQRVSKEKEGLTQDKGELIVQVTATERENRQQSESIAALRMDKEGLESNL
YEAQAQTAQLDVRKQQLEVENQDLLVRKENLQGEISRLVKEKDADLDKYEHSREELQKRL
AQLERDLSLALAQEKQAHEEDVDRLMREKNHQRAELEADREQILHCNALEKEDMQQAYNK
LKEEMEDAVSSLNRDRDNSLLMAENDRQQIISLLEQEKSTLSEKNSTLNLELAAANVEYE
RLKRESLARQEQDRSNINSLQSELKNFRSQFEQTCENHEKECKNLSTQIRDLERQKEAGL
REVGELKVELKLVEETRDNIRRDLIEANRRIREGEEMKEQMRKEMVELKRNLNDEVHEKE
AVQKTAEELRATVKKNEGEKIELNRSLVDTRQRANVLDEQKGSVTKEAADLRASLREVEK
ARLDARRELQDLRRQVKQLDSERSKLGREVIDLQQHIARDEEKEDESRRCQFDLKQKVVE
GEASREALRKEINNLQRKMAEAGDEARLKEKDYHMALEDSRRAERRMEDQKRNLEIQLET
IGAEDAELRLKLSGSEGRVNALEAQLARLEGAKRDIEFKLNSIVSSLRRTIGFRQEMPRS
RSPIRSRSPSPKRSRPTSPSKGFENTFATTTDGRGSPIQRTGSPDRSMSPARVLRSLSPM
REPQMSAVDVDPEAVRMALRDFVNQLAGSERERDDAIAQMRNLGIQYKELEVERERTENR
LQQVQKSMCEVEEDKRGIDGRLASAQTALMLQEETIRRSERDRKAMADKISSLERNVAAK
DSEGRQTQERIAKLRQQEARLEEEKKNLRNALEDADNRCTRLELARRSAEGELQRMKLAL
NDKDTENQVLQDRVESLTRQMQDLEGKAQSLQLTIDRLSSALTRTEEEESNQKEKVNVLS
SSISDNQATIAELEERLTHLQRALTSSEHDRRIMQERLDTTRQALNDSKKQNHSLMERVQ
GMQNEVSESEVRRAELEGQLRTGHGMLVQRQETEQEMSHRIEKLTSERQSLQERVNTLQR
ALATIETEKREHEREQIRLEKDKSALQKTLDKVEREKIRSEEIASKSVMERTSLDRSLCK
VEEDNQDLAVKVQNLQAQLAEAEQQHAQSFWWKSYQELQALVQQLLGLIDLTTRHRAETE
METDRLRQAQMQAERLLESRERANRQKTKGLEETIATLKDQLSIEMRKRQQYIQRSARTG
EEIEGLRSMLDSSLQNVGRDPSLDQHLLEIETRKLDDTLEVSSYGSRLPPRRRSPLRTPP
TRLSQQHFRRTLSPASMRKMKK
NT seq
7449 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgacaaaagtgaatccgattccgagttttctggtcaaggtcatgatgacaga
aacaaggatggcacagatgatgatatacaggaagagatagagtatgaggactcagagagt
gtgtctgtgtcggagaaacaagacatagaaggcaaagatattggagatgaaaacagtgga
ggtgatttccaagatactgctgatactacagtgaaaggtgaaggtcagatagaagaaacg
gaggataaaatacaacaggaagaccaagatgaaagtctagctgatacaaaggaagatgtt
actgatgttacacagaatacacatgacaccaccatacagtcaactgatccagttatgagt
gatgacgatgatagtgatagactagaacaaattcaaactgatgtccacctgttaaagtcc
aatgttgatgaaggcataagtgacttgtctgagataacggttcaagcgccaacacctgac
agggacatgattgaagaggaagaaggggattatagctataaagatgattttgaagaggat
aagcatgctagtgttagtgatgataatgagtttaacatatcggtagacaactatatggaa
tttcccgttgcttcaagaagttggtcaggagaggttgctgaccctgttggaaaaactcta
gaaacagattctgttgtaagtgacatttttgagcctcgtgcttcaacaagaatggatgag
actctacagccagcatacagccgctatgatgatctccaatccaaatacacaagaccaagg
cactcaccccatcagccagaagacctgaccctgacctacttaccagccaggggaatcagg
agttatgcccctttccttatgtcatctcccttgagtgaattttatcgagaggataataag
ttggaagactcggttctgcgagacaaggacaccgaggactacgagatacgaggtgagggc
gacagatacgagaaaatcccggcacgcattcgggagattatcaccaagaatctagcaacc
gatgaacgaaagccgctagcgatgtcaacgccaactccacaacaactgaaagaggagaat
cgacttttgtccagcgagttgaatcgagtcgaggacctcctcgcggccagtcgagcagaa
cgagacgagctggggatcaagtacaatgccctcagtgagaaggttctctcccttgatggt
tctattgcggcacaaagtgaaaactacatggagaacataagtcgagtctcgtcttcctct
cgcacatatcagctgcgtgcacgctggtcgtacaataaagacggagaaaatgatgaatca
agggaatctactcttgagcagtcgctacgaggagactctggtgctgaaggaggagacgga
gcatcacgccccttgctgcaacagaacatcgacctgcgacgcaaactagaggaggaacac
tcgagctacaagcgtaaactgcaggcgtaccaggacggacaggcgcgtcaggcccaactc
gtgcagaaactgcaggccaagcttctacaatacaagagaaaatgcacagaattcgaggat
aatattcgatataaagagttattgagtaaagacactgaaagaaagttacagagcacatca
gacaggctggacggtaccgaggcacgtctcaggatggcagagtcggaacataacatggac
ctggagcaggctctcatcaagcttgaggaggaacagcagaggtcttcaagtcttgcccac
gtgaactccatgctccgtgagcagctggaccaggcaacagctgccaaccaatcactgacg
agcgacatccacaagctgacaggtgattggcagaaggctcgggaagagctggacatcaag
gagaacgagtggcgcgatgaagaacagagcttcaatgagtacttcagcgcggagcatggt
cgtctcttatcgctgtggagggcagtcgtcgcattccgtcgcaacttcagcgagctgaag
acggcaacggagcgtgacctttcgcacacccgctctgatgtgaccaaggctgcccgcagc
atgcacacggcttgtctcaacctgaacgctaacatgcgcaacactgagactcagacacag
gtgtcttctgaccgtgagcgcggtgagcgtgcgtcgttggagagccagctgcgagactcc
cgtcgggaggtcgccgagctccaggcccgctacgacgctcacagtgctgagcttaatgcc
agggtgaacgagctgacgatgtccaatgagaagctgaagatccagctggaggagaaggac
aagacaattcagaacctgcgtcgcgccgttgaacaccttgaaattaagtctggagagagg
acatttgcagagatgcaggagtctgacatgtcgcgtgcgatccgtgatgagacagagtcc
ttgcataacgccctccgcagcatcgctgagtcggttctcaatgacgccgcagatgatgag
ccttcaagagatcttggtgagacagcactgtcccgtgcccgctcaacctccccacttgcc
cggggacggtcacctgacatgagagcccgctccaagtccccaatggctaggtcaaggtca
cctgctttcgctgacgccaccttctctgcagtgcaggctgctctcaacaaacgccagcta
cagcttgctgagttgcgtgccaagcttgctgctcagaaggaccacaacgccgctcagaag
aagatgatggatgacctggacaatgaaaaacgccgacttgaattgcagatccttaacctt
aaggaagaccttgatatttctcgtcgtgatagggaagacacatcgcgtgaccgtgaccga
gtaaagaatgctcttggccagacaagctcagagaaaaatacactggaaaaggtccgccag
gaactcaacgaccagatcgaacagctgaactctgagaacaccaagctccaggcagcgaac
acagagctgcagcgccagcgagataacctggaggatgagaaggatgacaacgttaaggac
aaagaaagacagatcaaggagaatgaacgatgccagcgaatcattgagcagcaggagcac
aagaactccggcctgaaggaagagctggttgccacaaaggaggctctcaaccgtgcactg
ctggacaaggaggtgcttgaccaacagcgtcttgaagtcagtgaggccctggacaaggct
gagatggtcaagactgagctggaaggtgagctgcataaatctcgctcagaggaagaggcc
ctaaaggatgccctggccaagatgcaggccctgaatgagggccttggctttgacaagatt
gagctcaacaagattatcatgcagatggaggctgagaaggcagctgtgtacggggagaaa
catgccctggaacaggagaggaccgggatcagggaggagctggtcagagttgagcaggag
aagatggaccttgacacagagaaagcaggtttgaaccagaccctggagctgagtgagatg
acccgccagcagctggaggaagagatcggcatgctcaacagggagaaggctgacgtcact
gaacaacttaactctatttctcgccagaagcaggcactaggagaggagctggtttcaatg
aggaaggactgcgagcgactcaccaaccagctacagcgtgtctcaaaggagaaggagggt
cttacccaggataagggagagctgattgtgcaggtgacagcgacagagcgtgaaaaccga
cagcagtcagagtcgatcgcggccctgcgtatggacaaggaaggcttggagagcaacctg
tacgaggcccaggcccagaccgcccagctcgatgtccgcaaacagcagctcgaggttgag
aaccaagaccttcttgtacgcaaggagaacctccagggtgagatatcccgtctagtgaag
gaaaaggatgccgacctggacaagtatgaacattcccgagaggagctgcagaaacgcctc
gcccagcttgagcgtgacctgtcacttgctctcgctcaggaaaagcaagctcatgaggag
gatgtggacagactcatgagggagaagaatcaccagcgtgctgaactggaggcagatcgt
gagcagatcctgcattgtaatgccctagagaaggaagatatgcagcaggcttacaacaaa
ctgaaggaggagatggaggatgcggtgtcctcactgaacagggaccgtgacaactccctc
cttatggctgagaatgacaggcagcagattatctcgctgctggagcaagaaaagagcacg
ctatccgagaagaactctacactgaacctggagcttgccgcggcaaatgtggagtacgag
cgactcaagcgggagtcccttgcacgccaggagcaggaccggtcaaacatcaactccctg
cagagcgagcttaagaacttccgctcacagtttgagcaaacttgtgagaaccatgagaaa
gaatgcaagaacctatcgacccagatccgtgaccttgagcgccagaaagaggctgggctg
cgtgaggtgggcgagctgaaggtagagctgaaactggtggaggagacccgcgacaacatc
cgccgagacctcatcgaggccaaccgcaggatcagagaaggtgaagagatgaaagaacag
atgcggaaggagatggttgagctcaagcgtaaccttaatgacgaggttcacgagaaggag
gctgtgcagaagactgccgaagagctccgtgccactgtcaagaagaacgagggagagaag
atcgagctgaatcgatccctcgtggacaccaggcagagggctaatgttttggatgagcag
aaggggtctgtcacaaaggaggcagctgatcttcgtgcgagtctgcgggaggttgagaag
gctcgtcttgatgctagacgggagctacaagacctcagacgccaggtgaagcagctagac
agtgagagaagcaagcttggtcgtgaagtgatcgacctgcagcagcatattgcacgggat
gaggagaaggaggatgagtccagacgctgccagtttgacctcaaacagaaggttgttgag
ggtgaggccagtcgggaggccctgaggaaggagatcaacaatctgcagcgcaagatggct
gaggccggggatgaggcacgccttaaagagaaggactatcacatggcattggaggacagc
cgtcgtgctgaaagacgcatggaggaccagaaacgtaaccttgagatccaacttgagaca
attggtgcagaggacgcggaacttaggctgaaactgagcggctctgagggtcgtgttaac
gctctcgaggcccagctcgctcgtctggagggagctaagagggatattgagttcaagctg
aacagcatcgtgtccagtctgagacgaacgattggattccgccaggagatgccacggtct
cgtagccccatcaggtcccgcagcccaagccccaagaggtcacgcccaacatcaccatct
aagggctttgagaacacatttgccaccacaactgatggtcgtggcagcccaatccagcgt
actggctccccagaccggtccatgagccctgcccgggtccttcgttccctctcgcccatg
agagagccccagatgtcggccgtagacgttgacccagaggcagtcaggatggccctccgt
gatttcgtaaaccagcttgccgggtctgagagggaaagggatgacgccattgcccagatg
cgtaaccttggcatccagtacaaggagctggaagtggaaagggagagaactgagaacaga
ctccagcaggtccagaagtccatgtgcgaggttgaggaagacaaacgtggtattgatggc
cgcctcgcaagtgcccagacagccctcatgctgcaagaggagacaatccgtcgtagcgag
cgtgaccgcaaggccatggctgacaagattagctcccttgagaggaacgttgctgccaag
gactctgagggcagacagacacaggagcgcattgccaagctgcgtcaacaagaggctcgt
ctggaggaggagaagaagaacctgcgtaacgccctcgaggatgctgacaaccgctgcaca
cgccttgaacttgcacgtagatctgccgagggtgagctccagaggatgaaactggctctc
aacgacaaagatactgagaaccaggtgctgcaggaccgtgtagaatcactgaccaggcag
atgcaagaccttgagggtaaggcccagtccctccaactgaccattgaccgcctcagctct
gcgctgaccagaacagaggaggaggagagcaaccagaaagaaaaggtgaatgtgctgagc
tcctcaatttcggacaaccaggccacgattgcagagctagaggagcgcctcactcaccta
cagagggctttgaccagcagtgaacatgaccgtcgtatcatgcaggagaggcttgacacg
accaggcaagccctgaatgattctaagaagcagaatcacagtctaatggagcgcgtacag
ggcatgcagaatgaagtgagcgaatccgaggtccgacgtgccgaacttgagggccagctc
aggactggacatgggatgttggtccagcgccaggagactgaacaggagatgagccaccgt
attgagaagttgacgtccgagcgccaaagccttcaggagcgtgtgaacaccctccagcgt
gcccttgccaccatagagacagagaaacgcgagcatgaacgtgaacagatccgcctcgag
aaggacaaatccgccctgcagaagacacttgataaggtcgagcgtgaaaagatacgctct
gaggagatcgcaagcaagtctgtgatggagcgtacatcgctggaccgctccctttgtaag
gtggaggaagacaaccaggacctcgccgtcaaggtgcagaacctccaggcacagcttgcc
gaggctgagcagcagcacgcacagagtttttggtggaaaagttatcaagagcttcaggca
ttagtccaacaacttctgggactgattgacctgacaacgcgtcaccgtgcggagacggag
atggagactgatcgcctccgtcaggctcagatgcaggctgagcgtctgcttgagtctcgt
gaacgtgctaaccgacagaaaaccaaggggctggaagaaacaattgcgaccttgaaggac
caactttcgattgagatgaggaagcgtcagcagtacatccagcgaagcgccaggacagga
gaggagatcgagggtctccgatccatgcttgactcgtcgctccagaatgtcggacgagac
cccagccttgaccagcacctcctggagattgagacgaggaaactggacgacacacttgaa
gtgtcaagttacggaagccgactgccgccacgtcgccgatcaccgctccgtaccccaccc
acccggctatctcagcagcactttcggcgtacacttagccccgcctctatgaggaagatg
aagaaatag
DBGET
integrated database retrieval system
