KEGG   Mya arenaria (softshell): 128203774
Entry
128203774         CDS       T09995                                 
Name
(RefSeq) exosome component 10-like
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
maea  Mya arenaria (softshell)
Pathway
maea03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:maea00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    128203774
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:maea03019]
    128203774
Messenger RNA biogenesis [BR:maea03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     128203774
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC Mitovir_RNA_pol A_amylase_inhib
Other DBs
NCBI-GeneID: 128203774
NCBI-ProteinID: XP_052761274
LinkDB
Position
9:complement(7768101..7794125)
AA seq 949 aa
MADEACGSEEKAKFLSEYEDVNQFMQQTLRSVLLATKSSNEMPAAGDDFDYYSSFPGFQG
LMNIEGKRILHVIQSILKHENVRANLGSMGGAADIEDKLDQLMDANDQILERVGTWLDEA
SGIKKDDSSLVIASATPKSTQKLASWNKKSPGSSSAAPNFRLLSAKNIQRPQLRFRDKVD
NRNAPFRPIITDKPNALKTLEESLKLPEGVTPEMSEQPEFKHPHPYQYELDHLTYQDNQT
SPCKAQEPGDIDETPCMFINTPEQLGPLVTMLKKQSEIAIDLEHHNYRTFQGMTCLMQIS
TRSHDYLIDTLELRSDLQFLNEVFTDPSIVKVLHGADSDIDWLQRDLGLYIVNMFDTGQA
ARVMNYSRFSLAHLLQQYCGVTADKQYQLADWRIRPLPEELSKYAREDTHYLLYVYDLLK
NELITRGNNSNNLLLSVLNRSRHLCMKVYQKQIHTPDSYLDLYRKNKKVFNSQQLYAFKE
LFNWRDETARLEDESYGYVLPNHMMLQICDILPRERPGVLACCNPIPPLVRQYLNEIHTI
IMKAREAPLTVKLTPVREKRPTIYQHPKYNSDSLLNCPHDLSHPSTDDTATPCVLDPGLM
TRQSALFSSGKTNMIIEVKDEPLLTAFNKNRPTKKPQTEAQKKVSRIKASFVSPYFMYLP
DKTGGKTVPRKSQMSKEEQSGSPWKLLPCSIKRKKESSDSPANSVLPTKRSRTDLQAEAM
PTNKHLRFTDEGETIEITDDDKKALPQDLKIPIRFQVPSKKKKKNRNKDIDLIESVQEHL
TNIRKIQEENETVLGKRPGDDQPSASEKTKKVKQKMKDSKKKKGQGKNGNKNSESSAMDT
ATDLVVIDSDEETVGEKAGGAKSAKGGLKTEVTIEIDDSDSNDAEVKVVEEFKPYDYTEG
AKQLLKDTKQRGKGHDYYNPQSSGRGKSKNMRNRSQKKGQKSLSWKSKK
NT seq 2850 nt   +upstreamnt  +downstreamnt
atggctgacgaagcatgtgggtccgaagaaaaagcgaaattcctttctgaatatgaagat
gtcaaccaatttatgcagcaaaccctgaggtctgtcctgctggccactaagagctccaat
gagatgccggctgcaggtgatgactttgactactactccagcttcccgggcttccagggt
cttatgaacatcgaggggaaaagaatcttacatgtaatacagagcatcctgaagcatgag
aatgttcgagcaaacctgggcagtatgggcggggcagctgacattgaggacaaactggac
cagctaatggacgctaatgaccagatactagagagagtgggcacatggcttgatgaagcg
tcgggtattaagaaggatgacagttcccttgtgattgcctcggcaacacccaaatctacc
cagaaactagcaagctggaataaaaagagccctggctcaagctcagcagctccaaacttc
cgtctcctgtcagcaaagaacatccagcgtccccagttgaggtttagagataaagtggac
aaccgtaatgctccatttaggcccatcataacagataaacctaatgccttgaagacactg
gaagaaagcctaaagttgccagagggagtcacaccagagatgtcagaacagccggagttc
aaacacccccatccctaccagtatgagctggaccatctcacgtaccaggataaccagacg
agcccatgtaaggcccaggagccaggagacattgatgagacgccatgtatgttcataaac
actcctgaacagcttgggcctcttgtaacgatgttgaagaaacagtccgagattgccata
gatttagagcatcacaactacaggaccttccagggaatgacgtgcctgatgcagatatct
acaagatcacatgactatctgatagacactcttgaactacgcagtgatcttcagtttcta
aatgaggttttcacggaccccagcattgtcaaggtgttacatggtgcagactcagacata
gactggttacagcgagacctgggcctctacattgtgaacatgttcgacacaggacaggcg
gctcgtgttatgaactatagtcgcttttctctcgcccatcttctacagcagtactgtgga
gtgacagcagataagcagtatcagctggctgactggagaatcaggccgcttccagaagag
ttgagtaaatatgcccgtgaggatacccactaccttctgtatgtgtacgacctactgaag
aatgagctgatcaccaggggaaataactccaacaatctcctgctttcggtcctcaacagg
agtagacacctctgtatgaaggtttaccaaaaacagattcacacaccagatagttatctg
gatctgtacaggaagaataagaaggttttcaactcccagcagttatatgcctttaaagag
ctcttcaattggagggatgaaactgccagactggaggatgaaagctatggatatgtttta
ccaaaccacatgatgcttcaaatctgtgacatcctgccccgtgaacggccgggagttctg
gcatgctgcaatccgataccgcccctggtacgacagtacctcaacgagatacacaccatc
atcatgaaggccagagaagcccctcttactgtaaagctaacaccagtccgagagaagcgt
cccacaatataccagcaccctaaatacaactctgacagcttattaaactgtccacacgat
ctatcacacccatccactgatgatacagctacaccgtgtgttttagacccaggcctgatg
actcgacagtcggctctcttttcctccggaaagacgaacatgatcattgaggttaaagat
gagccattgcttacggcattcaacaaaaacaggcctaccaaaaagccacagacagaagca
cagaagaaggtatcaaggataaaagcaagctttgtcagtccctattttatgtaccttcca
gacaagactggggggaaaactgtgccaaggaaaagtcagatgtctaaagaagaacagtct
ggttcaccctggaagctactgccatgttctataaagaggaaaaaagaatccagtgacagt
ccagcaaactcagttcttccaactaagaggtcgcgcactgacctacaggcggaggccatg
cccactaacaagcacctacgcttcaccgatgaaggtgagacgatagagatcactgatgat
gacaagaaagcgctgccacaggatcttaagattcccataagattccaggttccatccaag
aagaaaaagaagaatagaaataaagacatagacttaattgaaagtgttcaggaacacttg
acaaacattcgtaagatacaggaagagaatgaaacagttcttggtaaaagacctggagat
gaccaaccatctgcttcggagaaaacaaagaaagtaaaacagaaaatgaaagactctaag
aaaaaaaagggacaaggcaagaatgggaacaagaactctgaatctagtgcaatggatact
gccactgacttggtagtaattgatagtgacgaggaaactgttggtgaaaaagcaggtgga
gctaagagtgccaagggtggtttaaaaactgaggttactattgaaatagatgacagtgat
agtaatgatgctgaggtgaaggtggtggaagagtttaaaccttacgattacacagagggg
gcgaaacagctgctgaaagatacaaagcagagggggaaaggtcacgactactacaatcct
cagagttcaggccgaggaaaatctaagaatatgagaaaccggtctcagaagaaaggtcag
aagagtttatcatggaagtccaagaaatga

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