Mya arenaria (softshell): 128203774
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Entry
128203774 CDS
T09995
Name
(RefSeq) exosome component 10-like
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
maea
Mya arenaria (softshell)
Pathway
maea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128203774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128203774
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
128203774
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Mitovir_RNA_pol
A_amylase_inhib
Motif
Other DBs
NCBI-GeneID:
128203774
NCBI-ProteinID:
XP_052761274
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Position
9:complement(7768101..7794125)
Genome browser
AA seq
949 aa
AA seq
DB search
MADEACGSEEKAKFLSEYEDVNQFMQQTLRSVLLATKSSNEMPAAGDDFDYYSSFPGFQG
LMNIEGKRILHVIQSILKHENVRANLGSMGGAADIEDKLDQLMDANDQILERVGTWLDEA
SGIKKDDSSLVIASATPKSTQKLASWNKKSPGSSSAAPNFRLLSAKNIQRPQLRFRDKVD
NRNAPFRPIITDKPNALKTLEESLKLPEGVTPEMSEQPEFKHPHPYQYELDHLTYQDNQT
SPCKAQEPGDIDETPCMFINTPEQLGPLVTMLKKQSEIAIDLEHHNYRTFQGMTCLMQIS
TRSHDYLIDTLELRSDLQFLNEVFTDPSIVKVLHGADSDIDWLQRDLGLYIVNMFDTGQA
ARVMNYSRFSLAHLLQQYCGVTADKQYQLADWRIRPLPEELSKYAREDTHYLLYVYDLLK
NELITRGNNSNNLLLSVLNRSRHLCMKVYQKQIHTPDSYLDLYRKNKKVFNSQQLYAFKE
LFNWRDETARLEDESYGYVLPNHMMLQICDILPRERPGVLACCNPIPPLVRQYLNEIHTI
IMKAREAPLTVKLTPVREKRPTIYQHPKYNSDSLLNCPHDLSHPSTDDTATPCVLDPGLM
TRQSALFSSGKTNMIIEVKDEPLLTAFNKNRPTKKPQTEAQKKVSRIKASFVSPYFMYLP
DKTGGKTVPRKSQMSKEEQSGSPWKLLPCSIKRKKESSDSPANSVLPTKRSRTDLQAEAM
PTNKHLRFTDEGETIEITDDDKKALPQDLKIPIRFQVPSKKKKKNRNKDIDLIESVQEHL
TNIRKIQEENETVLGKRPGDDQPSASEKTKKVKQKMKDSKKKKGQGKNGNKNSESSAMDT
ATDLVVIDSDEETVGEKAGGAKSAKGGLKTEVTIEIDDSDSNDAEVKVVEEFKPYDYTEG
AKQLLKDTKQRGKGHDYYNPQSSGRGKSKNMRNRSQKKGQKSLSWKSKK
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaagcatgtgggtccgaagaaaaagcgaaattcctttctgaatatgaagat
gtcaaccaatttatgcagcaaaccctgaggtctgtcctgctggccactaagagctccaat
gagatgccggctgcaggtgatgactttgactactactccagcttcccgggcttccagggt
cttatgaacatcgaggggaaaagaatcttacatgtaatacagagcatcctgaagcatgag
aatgttcgagcaaacctgggcagtatgggcggggcagctgacattgaggacaaactggac
cagctaatggacgctaatgaccagatactagagagagtgggcacatggcttgatgaagcg
tcgggtattaagaaggatgacagttcccttgtgattgcctcggcaacacccaaatctacc
cagaaactagcaagctggaataaaaagagccctggctcaagctcagcagctccaaacttc
cgtctcctgtcagcaaagaacatccagcgtccccagttgaggtttagagataaagtggac
aaccgtaatgctccatttaggcccatcataacagataaacctaatgccttgaagacactg
gaagaaagcctaaagttgccagagggagtcacaccagagatgtcagaacagccggagttc
aaacacccccatccctaccagtatgagctggaccatctcacgtaccaggataaccagacg
agcccatgtaaggcccaggagccaggagacattgatgagacgccatgtatgttcataaac
actcctgaacagcttgggcctcttgtaacgatgttgaagaaacagtccgagattgccata
gatttagagcatcacaactacaggaccttccagggaatgacgtgcctgatgcagatatct
acaagatcacatgactatctgatagacactcttgaactacgcagtgatcttcagtttcta
aatgaggttttcacggaccccagcattgtcaaggtgttacatggtgcagactcagacata
gactggttacagcgagacctgggcctctacattgtgaacatgttcgacacaggacaggcg
gctcgtgttatgaactatagtcgcttttctctcgcccatcttctacagcagtactgtgga
gtgacagcagataagcagtatcagctggctgactggagaatcaggccgcttccagaagag
ttgagtaaatatgcccgtgaggatacccactaccttctgtatgtgtacgacctactgaag
aatgagctgatcaccaggggaaataactccaacaatctcctgctttcggtcctcaacagg
agtagacacctctgtatgaaggtttaccaaaaacagattcacacaccagatagttatctg
gatctgtacaggaagaataagaaggttttcaactcccagcagttatatgcctttaaagag
ctcttcaattggagggatgaaactgccagactggaggatgaaagctatggatatgtttta
ccaaaccacatgatgcttcaaatctgtgacatcctgccccgtgaacggccgggagttctg
gcatgctgcaatccgataccgcccctggtacgacagtacctcaacgagatacacaccatc
atcatgaaggccagagaagcccctcttactgtaaagctaacaccagtccgagagaagcgt
cccacaatataccagcaccctaaatacaactctgacagcttattaaactgtccacacgat
ctatcacacccatccactgatgatacagctacaccgtgtgttttagacccaggcctgatg
actcgacagtcggctctcttttcctccggaaagacgaacatgatcattgaggttaaagat
gagccattgcttacggcattcaacaaaaacaggcctaccaaaaagccacagacagaagca
cagaagaaggtatcaaggataaaagcaagctttgtcagtccctattttatgtaccttcca
gacaagactggggggaaaactgtgccaaggaaaagtcagatgtctaaagaagaacagtct
ggttcaccctggaagctactgccatgttctataaagaggaaaaaagaatccagtgacagt
ccagcaaactcagttcttccaactaagaggtcgcgcactgacctacaggcggaggccatg
cccactaacaagcacctacgcttcaccgatgaaggtgagacgatagagatcactgatgat
gacaagaaagcgctgccacaggatcttaagattcccataagattccaggttccatccaag
aagaaaaagaagaatagaaataaagacatagacttaattgaaagtgttcaggaacacttg
acaaacattcgtaagatacaggaagagaatgaaacagttcttggtaaaagacctggagat
gaccaaccatctgcttcggagaaaacaaagaaagtaaaacagaaaatgaaagactctaag
aaaaaaaagggacaaggcaagaatgggaacaagaactctgaatctagtgcaatggatact
gccactgacttggtagtaattgatagtgacgaggaaactgttggtgaaaaagcaggtgga
gctaagagtgccaagggtggtttaaaaactgaggttactattgaaatagatgacagtgat
agtaatgatgctgaggtgaaggtggtggaagagtttaaaccttacgattacacagagggg
gcgaaacagctgctgaaagatacaaagcagagggggaaaggtcacgactactacaatcct
cagagttcaggccgaggaaaatctaagaatatgagaaaccggtctcagaagaaaggtcag
aagagtttatcatggaagtccaagaaatga
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