Mya arenaria (softshell): 128204718
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Entry
128204718 CDS
T09995
Name
(RefSeq) X-ray repair cross-complementing protein 5-like
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
maea
Mya arenaria (softshell)
Pathway
maea03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
128204718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maea03400
]
128204718
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
128204718
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
128204718
NCBI-ProteinID:
XP_052762081
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Position
10:42108641..42131407
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AA seq
854 aa
AA seq
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MAKETQNSLPFEIPVVRATKENLSGYGRFVTNFDEEKVEINPWPVTGPRKARPGTDIIPG
VDCSQLTFKYEGNKYVSVKDIGRRMEVGTICEEEQSPDNKYVLVSEITFHPDCGEVFYPK
NGDPFITVLALPGDDFGKTEREAIAVLLDVGPSMNQAPPGVATPLETALEAITMILQRKM
FAESKDEVALVLVGSEETDNPLADDESYQHISIANPLGVVDFDFLQLVQNDVKPTTTSGD
FVDGIVVAMDHLMNALQGKKGFGFKRLIVMSDLGGEFGDDQVDTIIASIKNSGTELNIIG
PDFDDDDDAGPTPGTSGEERKEKTPQQRAGHALVRHILEEVDGECYSFSEALPALSYFQS
RQVRPTAWKCPLEIGPELKIPINGYVKVKDFKLKQSWKAVYAKDPEMEVGKLRTYHKNDE
EETEVDKDDMVEKHRYGTESVTIPEEDKGNMKYKAEKCFKVLGFTKMENVKRSEMMGDGC
MAVVAEKGDEAAGIALSALINALYETNMCAIVRRVYNASSSPRVGCLVAHIKADYECLYW
FELPFMEDVRQFTFGSLPLKEENPTNKKYKPTEDQLSAVDSLITSMDLSTAAQDEEEEST
ELLKPKLTFNPHFQRLYQCLQHRALNPDDELPELSPMIANYLKPPEEVVVRSQSNLESLR
AKFKLEAVKRKEEKTGENLFKENGDGEPAGKKVKVDGDLEGGMETIAKATVTEVGSTTPV
EDFMALISMKDEDKFEEACGQMQKRIQQIVLDSFGDQFYGKAMECVKCLREQCIKKQEPS
QYNTFIKSFKETLVSKARKDFLDKMVDGKQSLITSGECEGGAAPAEVEEFQAGEATQKDE
AKEEDTAEDLLDEL
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaaacacaaaactccctgccgttcgagatacctgtggtcagagccacaaaa
gaaaatctgagtggatatggacgatttgttacaaattttgatgaggaaaaggtggaaata
aacccttggccagtcacaggtccacgaaaagcacgaccgggaacggatataatacctggt
gtagattgcagccaacttaccttcaaatatgagggcaacaagtatgtctcagttaaggac
ataggcaggcgaatggaagtaggaacaatttgtgaggaagaacagagcccagacaataaa
tacgtgcttgtgtccgaaattacattccatccggactgcggtgaagttttctatccgaaa
aatggcgacccatttataacagttcttgctctaccaggtgacgactttggaaaaactgaa
agggaagctatagcagttctgctagatgtgggaccgtccatgaaccaggccccaccaggt
gtagccacacctctggagactgccctggaggctatcaccatgatacttcagaggaagatg
tttgccgagtccaaggatgaggtggccttggttcttgttgggtctgaggaaacagacaat
ccactagcggacgatgaatcctatcagcacatctccatcgctaaccctcttggtgtggtc
gactttgactttctgcagctcgtgcagaatgatgttaaacccaccacaacaagtggagac
ttcgtggatggtatagttgtggcaatggatcatctgatgaatgccttgcagggaaaaaag
ggttttggcttcaagcgactgatcgtaatgtccgaccttggcggtgagtttggggatgac
caggtggacaccatcatagccagtataaaaaactctggcacagaactcaacatcataggc
ccagattttgatgatgatgatgacgctggtcccacccccggcacatctggtgaagagcgg
aaggagaagacaccccaacaacgtgctggacacgcccttgtacgacacatcctggaggag
gtggatggggagtgctactcatttagtgaagcccttccagccctgtcatatttccagtct
cgccaggtgaggcccaccgcatggaaatgtccactcgaaattggaccagaactgaagata
cccatcaatggatatgtcaaggtgaaagacttcaaactgaaacaatcctggaaggcggtg
tatgccaaggatccagagatggaagtaggcaagctgaggacgtaccacaaaaatgacgag
gaagaaacagaagtggacaaagatgacatggtcgaaaagcatcgttacgggacagaatcg
gtgacaataccggaagaagacaaaggcaacatgaagtacaaggctgagaaatgtttcaag
gtccttggcttcacaaagatggagaatgtgaagcggtcagagatgatgggagatggctgt
atggccgttgtggcggaaaagggagatgaggctgcaggtatagcattatcggcccttata
aatgccttgtatgagacgaacatgtgtgcaattgttcgccgggtctacaacgctagttcc
agtccacgagttgggtgtctggtggcgcacataaaggctgattatgagtgtctgtactgg
tttgagctgccttttatggaggatgttcgacagttcacatttggttccctgccattgaaa
gaggaaaaccccacaaacaagaaatataaaccaacagaggaccagttgtcagcggtagac
agtctcatcaccagtatggatctcagcacagcagctcaggacgaagaagaggagtcgact
gaattgttgaagcctaaattgacctttaacccccactttcagaggttgtaccagtgtctt
caacacagggccctaaatccagacgatgagctaccagagttatctcccatgatcgcaaac
taccttaaacccccggaggaggtcgtcgtgcgttcccagagtaacctagaatctctacgg
gccaaattcaaactggaggcagtgaagagaaaagaggagaaaactggcgaaaatctgttc
aaagagaatggtgatggagagccagcaggaaagaaagtcaaagttgatggtgaccttgaa
ggaggcatggaaaccatcgccaaggcaactgtaactgaggttggttctacaactccggta
gaggactttatggccttgatctcaatgaaggatgaggacaagtttgaggaagcctgtggc
cagatgcagaagagaatacagcagattgtgctagactcattcggggaccagttttacggt
aaagccatggagtgtgtgaaatgtctccgtgaacagtgtattaagaaacaagagcccagc
caatacaacacatttatcaagtcctttaaagaaacactcgtgtcaaaagccagaaaagat
ttcttggataagatggtggatgggaagcaaagtttgataacatcaggagagtgtgagggt
ggggctgccccagcagaggttgaagagttccaggcaggagaggctactcagaaagatgag
gcaaaagaggaggacactgcagaggacctgcttgacgaactgtaa
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