Mya arenaria (softshell): 128205558
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Entry
128205558 CDS
T09995
Name
(RefSeq) nuclear receptor ROR-alpha B-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128205558
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
maea03310
]
128205558
Transcription factors [BR:
maea03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128205558
Nuclear receptors [BR:
maea03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
128205558
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
128205558
NCBI-ProteinID:
XP_052763248
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Position
10:complement(10708127..10730351)
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AA seq
818 aa
AA seq
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MDYPSFSFEDMDASLSNFLEETLSRVSPLPVTKDTHVDVKNTSLGQKLVNCPSSQLKYTD
GKEGGSERCTDIGVETVSKASDFGGCMTTLIGTQEGVVTSDDDIHRFIVEHGSTANSGHE
LDNPNFYTLEAPSVTMATSDVKGVQYENSSDLLNMGQNSYGSFSVNTNVPQESNTYTQGE
NHVVYTTGHDYHSLSAGQNTHSPLTEPSYMDSEPQEAVFVMGETEIHSSEPTCISIMETT
TSEHDIDQALDLIIDHNRDIPATNQADSDISHQHLSSSSLPQLSGQPTGEDDSSKMKPRE
KKRRRREKNPAPPPEAILPPCKVCGEKSSGYHYGTNTCEPCKAFFRRTLKKKEVDYKCKC
CHGEQEIWKQGPYKNGCPACRYERCLTVGMSKNAIKIGRYTISHKTSNIKQVKSLESRER
TSQADGADNSPVNLVTSPQPPEESQGDILNVQDPQPGPSGCNTDETQAARSLIEIAFSQA
ISQTSPLSNVELSSPISSATSSSALDSDYALSPTSSIASLEPSGSQGRPVASISNTPSYL
KSGMTLKEIDTTVKIVTEAHQSTGVIPERSADEIKRRQAEYLEKYKLKTQLFGEMRAISR
AEFAEFYKATGIDIDGRHGEIEAALEFFQKRIAFIVAFAKAIPGFKDLCLDDQASLIKVT
RFESTVISAYKQMLVNVNKSTEVVVTPWGRTFHLSELERFFPIDIIKLRYKMAVRLNALG
LSLQEEAILRGIVAMCPDQCELKDRAKVESIQEKLFVCLQHMLNVRHGGTGNLLYKIVDI
ITELRTLTERDAQFTRGVFNDMNPHFKEKFSLLREFIT
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggattatcccagcttcagttttgaagacatggatgcatcgttatctaattttctagag
gagactttgagccgagtttcaccactgcctgtcacgaaggacacacatgttgatgtcaag
aatacatcactggggcaaaagctggtcaattgtccgtcctctcagctcaaatacaccgat
ggtaaagaaggtggctctgaaagatgcacagatattggagttgagacagtgagtaaggca
tctgactttggaggttgtatgaccacattgataggaacacaagaaggagtagtgacttca
gatgatgacatacataggttcatagttgaacacggaagcacggcaaactcaggccatgaa
ttggataatcccaacttctacaccctagaagcaccttctgttaccatggctacaagtgat
gttaaaggagtacaatacgaaaatagctcagatttgttaaacatgggtcaaaattcttat
ggcagtttcagtgttaatacaaatgtgccacaagaatcaaacacttacacgcaaggtgaa
aatcacgtggtttataccactggacatgactaccattctttatctgctggacaaaacaca
cacagtccacttactgagccttcttacatggatagtgagcctcaagaggctgtctttgta
atgggagaaactgaaatacattccagtgaacctacatgtatcagtattatggaaaccaca
acttcagagcatgatatagaccaggcattagatctcatcatcgatcacaaccgtgacatt
ccagcaacaaaccaggcagatagtgatatttctcatcaacacttgtccagttcatcacta
ccacagttatcaggacagcctactggggaagacgatagttcaaaaatgaagcctagagaa
aagaaacgacgaagacgggagaagaatccggccccacctcctgaggcgatactgcccccg
tgtaaagtgtgtggtgaaaaatcgtcaggctatcattacggcacaaacacttgtgaacca
tgcaaggcatttttccgacgcacattgaagaagaaagaggtggactacaagtgtaaatgc
tgccatggcgagcaggaaatatggaaacagggtccctacaaaaacggctgcccagcctgt
cgctatgaacgatgcctcactgtcggcatgtccaaaaacgcaatcaaaattggaagatat
acaatcagccataaaacaagcaatatcaaacaagtaaaaagcctggagtccagagaaaga
accagtcaagccgacggagcagacaacagtccggtgaaccttgtgaccagtccacaacct
cctgaagagtcccaaggagacattttaaatgtccaagatccacaaccaggaccaagtggt
tgcaacacagatgaaactcaggccgcgagaagcttgattgagatcgctttttcccaggcg
atttcacaaaccagtccactatccaacgttgaactgtcatcccctatatcatctgccacc
tcctcgtctgccctagattcagactacgctctcagcccaacctcctccatcgcctcccta
gaaccctcaggatcacagggtcggccagtggcatccatctccaatactccatcttaccta
aaatctgggatgacactgaaagagattgatacaacagttaagatagttacagaggctcac
cagagcacaggggtgatcccagaacgatcagctgatgagatcaagaggaggcaggctgag
tacctggagaagtacaaattgaagacacagctgttcggggaaatgagagcaatttcccgg
gccgagtttgcagagttttataaggcaacaggaattgatatcgatggccgtcatggggaa
attgaagctgctctggaatttttccagaagagaatagcattcatagtggcgtttgcaaaa
gccatacctggtttcaaggatttgtgtttggacgaccaggcatcattaatcaaagttacc
agatttgaaagcaccgttataagtgcctacaagcaaatgctggtcaacgttaacaagtcc
actgaagtagtggtcactccatggggtcggacatttcacctgagcgagctcgagcgcttt
ttcccaatagacattatcaagttaagatacaagatggctgttcggctgaatgcattggga
ctctcactacaggaggaggctattctaaggggcatcgtagcaatgtgcccagatcagtgt
gagttgaaggatagagccaaagtggaaagcattcaggagaagctgtttgtgtgtttacaa
cacatgttgaatgttcgccacggagggacgggaaacctgctctacaagatcgtggacatt
atcactgaattgcgcacgttgacagaacgcgacgctcagttcactagaggggtcttcaac
gatatgaaccctcatttcaaggaaaaattctcattgttaagagaatttattacctga
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