KEGG   Mya arenaria (softshell): 128205560
Entry
128205560         CDS       T09995                                 
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
  KO
K08533  RAR-related orphan receptor beta
Organism
maea  Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:maea00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:maea03000]
    128205560
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:maea03310]
    128205560
Transcription factors [BR:maea03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    128205560
Nuclear receptors [BR:maea03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   128205560
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 128205560
NCBI-ProteinID: XP_052763251
LinkDB
Position
10:complement(10760026..10778439)
AA seq 818 aa
MDYPSFSFEYMDASLFNFLEETLSRVSPLPVNKDAHVDVKNTSTGQRLTPCPSSQLNYTD
GKVGGLERCTYTRVETVSEASIIGGCMTTLVGTHEGIVTSDDGIHSIIVEQESTANSGHE
LDYPTVYTLEAPSVTMATSDVNGVQYEKNSDLLNICQNSSGSFSVSTNVSRELNTSRQGE
DHVVYTTGHDYYSITPGQNLHHSLTEPSYMSSEPQEAVFLMGENEIHSTEPLCSSILETT
TSEHDIDQVLDLIIDHSHDIPATNQTGSDISHPLSSSFTLPHLSGPPPAEDYNSKVKPTE
KRRRRREKNPDPPPEAILPPCKVCGDKSSGYHYGTNTCEPCKAFFRRTLKKKEVDYKCKC
CRDEQEIWKKGHYKNGCSACRYERCLAVGMSKNAIKIGRYTNNHKTSNIKQVKSLESRKR
TSQADGADNSPVNLVTSPQSPQESQGTNLDAQDPLPGPSGCGTDDSQAARSLFEIGLSKA
ISHTSPLSNVDLSSPRPSATSSSALESDYALSPNSPIASLEPSGSQGRPLASTCTTPYYL
KSGMTLKEIDTTVKIVTEAHRSTGLIPKQSADEVKRKQAEYLEKYKLKTQLFGEMRTISR
AEFAEFYKATGLDLDGRRERINAAMDHFQKRITLFVAFAKAIPGFNELCLDDQLSLIKVS
RFESSLISAYKQMLVNFNQSTEVAVTPWGGTFHLSELQGFLPLDILKLRFKMAIRLNALG
LSLQEEAVLRGIVTMCPDQCELKDRAKVECIQEKLFVCLQHMLNVRHGGTGNLLYKIMDI
ITEMRILTEGLSQFARGALKDMNPHFKEKFSLLREFMS
NT seq 2457 nt   +upstreamnt  +downstreamnt
atggattatcccagcttcagtttcgaatacatggatgcgtcgttatttaattttctagag
gagactttgagccgagtttcaccactgcctgtcaacaaggacgcacatgttgatgtcaag
aatacatccaccggacaaaggctgaccccttgtccgtcctctcagctcaattacacagat
ggtaaggtgggtggccttgaaagatgcacatatactagagttgagacagtgagtgaggcg
tctatcattggaggttgtatgaccacactggtaggaacacacgaaggaatagtgacttca
gatgatggcatacatagtatcatagtcgaacaggaaagcacagcaaattcaggtcatgaa
ttggattatcccaccgtctacaccctagaagcaccttctgttaccatggctacgagtgat
gttaatggagtacaatatgaaaaaaactcagatttgttaaacatctgtcaaaattcttct
ggcagctttagtgttagtacaaatgtgtcccgagaattaaacacttctaggcaaggggaa
gatcacgtggtttataccactggacatgactactattctataactcctgggcaaaaccta
caccattcactaactgagccttcctacatgtctagtgagcctcaagaggctgtcttttta
atgggagaaaatgaaatacattccactgaacctttatgtagcagtattttggaaaccaca
acctcagagcatgacatagaccaggtattagatctcatcatcgatcacagtcatgacatt
ccagcaacaaaccagacaggtagtgatatttctcatccactttcatcaagttttacacta
ccacatttatcaggaccgcctcctgcggaagactataattcaaaagtaaagcccacagaa
aagaggcgacgaagacgggagaagaacccagacccacctcccgaggcgatactgcctccg
tgtaaagtatgtggtgataaatcatcgggatatcattacggcacaaacacttgtgaacca
tgcaaggcatttttccgacgcacattgaagaagaaagaggttgactacaagtgtaaatgc
tgccgtgatgagcaggagatatggaaaaagggtcactacaagaacggctgctcagcctgt
cgctacgagaggtgcctcgccgtcggcatgtccaaaaacgcaatcaaaattggaagatat
acaaacaaccataaaacaagcaatataaaacaagtgaaaagcctggagtccagaaaaaga
accagtcaagccgacggagcagacaacagtccggtgaaccttgtgaccagtccacaatct
cctcaagagtcccaaggaaccaatcttgatgcccaagatccactaccaggaccaagtggc
tgtggcacagatgactctcaagcagcgagaagcttgtttgagatcggtctttccaaggcg
atatcacacaccagtccactgtccaacgttgacctgtcatctcctagaccatctgccacc
tcctcgtccgccctagagtcagactacgctctcagcccaaactcccccatcgcttcgcta
gaaccctcaggttctcagggtcggccgttggcatccacctgcactactccctattattta
aaatctgggatgacactgaaagagatcgacactacagttaagattgttacagaggctcac
cggagcacagggttgatcccgaaacaatcagctgatgaggtcaagaggaagcaggctgaa
tatctggagaagtacaaattgaagacacagctgttcggggaaatgagaaccatttcccgg
gccgagtttgcagagttttataaggccacaggacttgatttagatggccgtcgtgagaga
attaatgcggccatggatcatttccagaagagaatcacattgtttgtggcgtttgcaaaa
gccataccaggtttcaatgagttgtgtttggacgaccagttatccttgatcaaagtgtcc
agatttgaatctagccttattagtgcctacaagcaaatgctggtcaactttaatcagtcc
actgaagtagcggtcactccatggggtgggacatttcacctgagcgagctccaaggcttt
cttcctttagacattcttaagttaagattcaagatggccatccggctgaatgcattggga
ctctcactacaggaggaggctgttctaagaggcatcgtaacaatgtgcccagatcagtgt
gagttgaaggatagagccaaagtggagtgcattcaggagaagctgtttgtgtgtttacaa
cacatgttgaatgttcgccacggagggacgggaaacctgctctacaagatcatggacatt
atcactgaaatgcgcattttgacggaaggcttgtctcagttcgctagaggtgccttaaaa
gacatgaaccctcatttcaaggagaaattctcattgttaagagaatttatgagctga

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