Mya arenaria (softshell): 128205560
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Entry
128205560 CDS
T09995
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128205560
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
maea03310
]
128205560
Transcription factors [BR:
maea03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128205560
Nuclear receptors [BR:
maea03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
128205560
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
128205560
NCBI-ProteinID:
XP_052763251
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Position
10:complement(10760026..10778439)
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AA seq
818 aa
AA seq
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MDYPSFSFEYMDASLFNFLEETLSRVSPLPVNKDAHVDVKNTSTGQRLTPCPSSQLNYTD
GKVGGLERCTYTRVETVSEASIIGGCMTTLVGTHEGIVTSDDGIHSIIVEQESTANSGHE
LDYPTVYTLEAPSVTMATSDVNGVQYEKNSDLLNICQNSSGSFSVSTNVSRELNTSRQGE
DHVVYTTGHDYYSITPGQNLHHSLTEPSYMSSEPQEAVFLMGENEIHSTEPLCSSILETT
TSEHDIDQVLDLIIDHSHDIPATNQTGSDISHPLSSSFTLPHLSGPPPAEDYNSKVKPTE
KRRRRREKNPDPPPEAILPPCKVCGDKSSGYHYGTNTCEPCKAFFRRTLKKKEVDYKCKC
CRDEQEIWKKGHYKNGCSACRYERCLAVGMSKNAIKIGRYTNNHKTSNIKQVKSLESRKR
TSQADGADNSPVNLVTSPQSPQESQGTNLDAQDPLPGPSGCGTDDSQAARSLFEIGLSKA
ISHTSPLSNVDLSSPRPSATSSSALESDYALSPNSPIASLEPSGSQGRPLASTCTTPYYL
KSGMTLKEIDTTVKIVTEAHRSTGLIPKQSADEVKRKQAEYLEKYKLKTQLFGEMRTISR
AEFAEFYKATGLDLDGRRERINAAMDHFQKRITLFVAFAKAIPGFNELCLDDQLSLIKVS
RFESSLISAYKQMLVNFNQSTEVAVTPWGGTFHLSELQGFLPLDILKLRFKMAIRLNALG
LSLQEEAVLRGIVTMCPDQCELKDRAKVECIQEKLFVCLQHMLNVRHGGTGNLLYKIMDI
ITEMRILTEGLSQFARGALKDMNPHFKEKFSLLREFMS
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggattatcccagcttcagtttcgaatacatggatgcgtcgttatttaattttctagag
gagactttgagccgagtttcaccactgcctgtcaacaaggacgcacatgttgatgtcaag
aatacatccaccggacaaaggctgaccccttgtccgtcctctcagctcaattacacagat
ggtaaggtgggtggccttgaaagatgcacatatactagagttgagacagtgagtgaggcg
tctatcattggaggttgtatgaccacactggtaggaacacacgaaggaatagtgacttca
gatgatggcatacatagtatcatagtcgaacaggaaagcacagcaaattcaggtcatgaa
ttggattatcccaccgtctacaccctagaagcaccttctgttaccatggctacgagtgat
gttaatggagtacaatatgaaaaaaactcagatttgttaaacatctgtcaaaattcttct
ggcagctttagtgttagtacaaatgtgtcccgagaattaaacacttctaggcaaggggaa
gatcacgtggtttataccactggacatgactactattctataactcctgggcaaaaccta
caccattcactaactgagccttcctacatgtctagtgagcctcaagaggctgtcttttta
atgggagaaaatgaaatacattccactgaacctttatgtagcagtattttggaaaccaca
acctcagagcatgacatagaccaggtattagatctcatcatcgatcacagtcatgacatt
ccagcaacaaaccagacaggtagtgatatttctcatccactttcatcaagttttacacta
ccacatttatcaggaccgcctcctgcggaagactataattcaaaagtaaagcccacagaa
aagaggcgacgaagacgggagaagaacccagacccacctcccgaggcgatactgcctccg
tgtaaagtatgtggtgataaatcatcgggatatcattacggcacaaacacttgtgaacca
tgcaaggcatttttccgacgcacattgaagaagaaagaggttgactacaagtgtaaatgc
tgccgtgatgagcaggagatatggaaaaagggtcactacaagaacggctgctcagcctgt
cgctacgagaggtgcctcgccgtcggcatgtccaaaaacgcaatcaaaattggaagatat
acaaacaaccataaaacaagcaatataaaacaagtgaaaagcctggagtccagaaaaaga
accagtcaagccgacggagcagacaacagtccggtgaaccttgtgaccagtccacaatct
cctcaagagtcccaaggaaccaatcttgatgcccaagatccactaccaggaccaagtggc
tgtggcacagatgactctcaagcagcgagaagcttgtttgagatcggtctttccaaggcg
atatcacacaccagtccactgtccaacgttgacctgtcatctcctagaccatctgccacc
tcctcgtccgccctagagtcagactacgctctcagcccaaactcccccatcgcttcgcta
gaaccctcaggttctcagggtcggccgttggcatccacctgcactactccctattattta
aaatctgggatgacactgaaagagatcgacactacagttaagattgttacagaggctcac
cggagcacagggttgatcccgaaacaatcagctgatgaggtcaagaggaagcaggctgaa
tatctggagaagtacaaattgaagacacagctgttcggggaaatgagaaccatttcccgg
gccgagtttgcagagttttataaggccacaggacttgatttagatggccgtcgtgagaga
attaatgcggccatggatcatttccagaagagaatcacattgtttgtggcgtttgcaaaa
gccataccaggtttcaatgagttgtgtttggacgaccagttatccttgatcaaagtgtcc
agatttgaatctagccttattagtgcctacaagcaaatgctggtcaactttaatcagtcc
actgaagtagcggtcactccatggggtgggacatttcacctgagcgagctccaaggcttt
cttcctttagacattcttaagttaagattcaagatggccatccggctgaatgcattggga
ctctcactacaggaggaggctgttctaagaggcatcgtaacaatgtgcccagatcagtgt
gagttgaaggatagagccaaagtggagtgcattcaggagaagctgtttgtgtgtttacaa
cacatgttgaatgttcgccacggagggacgggaaacctgctctacaagatcatggacatt
atcactgaaatgcgcattttgacggaaggcttgtctcagttcgctagaggtgccttaaaa
gacatgaaccctcatttcaaggagaaattctcattgttaagagaatttatgagctga
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