Mya arenaria (softshell): 128206846
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Entry
128206846 CDS
T09995
Name
(RefSeq) splicing factor 1-like
KO
K13095
splicing factor 1
Organism
maea
Mya arenaria (softshell)
Pathway
maea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128206846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maea03041
]
128206846
Spliceosome [BR:
maea03041
]
Complex A
Other components
Complex A specific factors
128206846
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
KH_KRR1_2nd
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
128206846
NCBI-ProteinID:
XP_052765506
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All DBs
Position
2:complement(51718547..51734568)
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AA seq
641 aa
AA seq
DB search
MSNHQKRPMDFGSSPSWGGGVGTNGKDDGGGSERKRKRKSRWGAEETVEKTVIPGMPTIL
PANLSKDQEKQYLLHLQIEEISRRLRTGDLGIPANPEDRSPSPEPIYNNEGKRLNTREYR
TRKKLEEDRHRLVQEASGLNTEYKPPADYKPPVVRVNDKVMIPQEEHPDINFVGLLIGPR
GNTLKTLEKETGAKIIIRGKGSVKDGKIGRKDGQPLPGEDEPLHAYVTANNPENVLKAVE
KIKSIIKESVEVPEGQNDLRKQQLRELALLNGTLRENDGLAKLRQIQQAQSIVTNTIICT
NCGGAGHLGKDCKQSRPGDTYRSMIQQESSTDKAKMDSEYMSLMAELGEGPPPPKQNTGS
HYRQQMPQSQPHISRFNQPPPNPMGGFNNFPPTNRGPPPSLLSLNNTRPPQNMYQQPQQT
YQHQNMQGIHPPGQMQGPPPMQQQMGHQGQFQPHSSVPQPVAPPVQPQHGMPMGGPGQVA
PVPPPSSMNMAAPVPPPAPWSSAAASHMNTNPIQSMAMGVRPPPTTMMGAVPPPPPPNSH
QPATSVAPTMPWMQQGAVPPPPPSSQGSWQAAPPPPPVSMGQMPWQQAQSMGQPTSVAPP
PPPPSSGQGFNMPPPPPSGYDPNQMSGVNQLIVAPPPPPPN
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcatcaaaaacgaccaatggattttggatcaagtcctagctggggtggtggt
gttgggacaaatggtaaagatgatggtggaggctctgagagaaagcgcaagcgaaaaagt
cgatggggagctgaggagacggtggagaagacagtcattccaggcatgcccacaatactt
cctgcaaacctctccaaggaccaggaaaaacaatatcttttgcacctgcaaatagaggag
atcagtcgacggttgcggacaggcgaccttggtatcccagcaaacccagaggacagatcg
ccgtcaccagagcccatctacaacaacgagggtaaacggctgaacacccgcgagtaccgc
accaggaaaaagctggaggaagaccgacacagactcgtacaggaggcctctggactcaac
acagaatacaaacctccagctgactataagcctccagtagttcgtgttaatgacaaagtg
atgattccacaggaggaacacccggacattaactttgttgggctgcttattgggcctcgt
ggaaacaccctcaagactcttgagaaggagactggggccaagataatcatccgagggaag
ggttcggtgaaggatgggaagattggcagaaaggatggacagcccctgccaggagaagat
gagcccctccatgcctatgtgacggccaacaaccctgaaaatgttctcaaagcagtggaa
aagatcaagagcatcattaaggagagtgtggaggtgccagaggggcagaatgacctccgt
aaacagcagctccgtgagctcgccctgctcaatggcaccctcagggagaacgacggactt
gcgaagctgaggcaaattcagcaggcccagagtattgtgacaaacacaatcatctgtacc
aactgtggtggggcaggccatcttggcaaggactgtaagcagtcacgtccaggagacaca
taccgcagcatgatacagcaggagagctcaacagacaaggccaagatggacagtgagtac
atgtcccttatggctgagcttggagagggtcccccaccccccaaacagaacacagggagc
cactatcgacagcagatgccccagagtcagccccacatctcacgcttcaaccaaccgcct
cccaatccaatgggtggattcaacaatttccctccaactaatcgtggtcctccaccttcc
ctgctatctctcaacaacacccggcccccacagaacatgtaccagcagcctcaacagaca
taccaacatcaaaatatgcaaggtatccaccctccaggacagatgcagggtccaccgcca
atgcagcaacagatggggcaccaaggccaattccagcctcacagctctgtgccccagcct
gtagccccacccgtccagccccaacatggaatgcccatgggtgggccaggccaggtggcc
cctgtgccaccccccagctctatgaacatggctgctcctgttccccctcctgcaccctgg
agctctgctgctgcttctcacatgaacacaaaccccatacaatcaatggctatgggtgtg
cggccacctccaactaccatgatgggtgcggttcccccaccccctcctccaaactcacac
cagccagccacctctgtggcccctactatgccttggatgcaacagggtgcagtaccacca
cccccaccatcatctcaaggaagctggcaggctgcgcctcctccaccaccagtctccatg
ggccagatgccctggcaacaggcacaatccatgggccagcccaccagcgtggccccaccc
cctcccccaccctcctctggtcaggggtttaacatgccgccaccccctccctctggctac
gaccccaaccagatgtcgggggtgaaccagctcattgtggctccaccacctccacctcca
aactga
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