Mya arenaria (softshell): 128207293
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Entry
128207293 CDS
T09995
Name
(RefSeq) nuclear pore complex protein Nup85-like isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
maea
Mya arenaria (softshell)
Pathway
maea03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128207293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128207293
03036 Chromosome and associated proteins [BR:
maea03036
]
128207293
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128207293
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128207293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
128207293
NCBI-ProteinID:
XP_052766096
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Position
2:27921006..28008231
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AA seq
652 aa
AA seq
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MAERERDPYYLELPHTSGTAGLQATWGLGNQLFVFPGKRGPLYSGHAEGGGVSVINEVRW
ETDMHGTVTRKLVNETHNIFVTLQNQAVESTGPGLKPLLVKASKQYRSVLKACSLDVYSM
AESCEDGDSKAVLEEQMKIFNMTELIWSLCEILWIDLAPGGVVISQLLEWLRWHFTEGEQ
LFAEITRDEFPEQHREYWDCIYRLVLQGQLDKVRILLSHNAAARTDAFLSMDEVLRKMPI
FNQLYRGNSVSEFDMKWRHWRDDCERRLESGEFSTSTNLDIMARILCGEESVFAHIKDLC
ETWYHMLVSKMLYQRPTVKSVDLHYYAQASMDEFRGDGRMSEMDSILLSTLEFDVHQVIK
DCSAVLSGWWFVSHLTDILHHCGQLESHRLEFGHNLREYLLLDYATSLMSHCSLWQVGVD
YLDQCHDTGRHYLEQFIDNMPIETERKAHKLLNICEKRNMPEQIKSICKVMGMRCLKNQR
LGAALSWFLRSKDVAFATLIAEKFLSEYNEHGEFSNLDLLDNLGSSMLISHRLTFLAKYR
EYHRLYEERELYAAGSLLLSLLTSRLAPREFWITLLKDAITLLEAKECIYGRKETFELMH
CLEELTKDRQFLAPDNEKEDISDLRETIDLLNLALTRNLARSIVIEGVIKPT
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcgcgaaagagatccgtattatttggagttgccgcacacaagtggaacggcc
gggctacaagctacttggggtttgggcaatcagctgtttgtattccctggcaaaagagga
ccactctactctggtcatgctgagggtggtggtgtatccgtgatcaatgaggtgcgatgg
gagacagacatgcatggcactgttactaggaaactggtcaatgagacacacaatatattc
gtcacacttcaaaaccaggcagttgagtctactgggccaggacttaaaccgctgttggtg
aaggcaagtaagcagtatcggagtgttttgaaggcctgcagtcttgacgtctacagcatg
gctgagagctgtgaggatggtgactcgaaggccgtgttggaagaacagatgaagatcttc
aacatgactgagctcatatggagtctgtgcgaaatactgtggatcgaccttgcccctggg
ggagttgtaatctctcagctgttggaatggcttcgctggcattttactgagggcgaacag
ctatttgctgaaatcacaagagatgaatttcctgagcagcaccgagaatactgggattgt
atctaccgccttgttcttcaaggccagctggataaagttcgcattcttctctcccacaat
gcagccgctcgcacggatgccttcctgagcatggacgaggtccttaggaaaatgcccatt
ttcaatcaactgtataggggaaactccgtctctgagtttgacatgaaatggcgtcactgg
cgggatgattgtgaacgacgtctcgagtctggggaattctccaccagtacaaatcttgat
ataatggcaaggatactatgcggggaagaaagtgtatttgcccatattaaagacctctgc
gagacatggtaccacatgcttgtctccaagatgttgtaccagcgacctacagtcaaatct
gtggaccttcactactatgcccaggcaagtatggatgagtttcggggcgatggtcgtatg
agtgagatggacagtattcttctgtccacgctcgagttcgacgtgcatcaggtcattaag
gattgcagtgctgtattgagcggctggtggtttgtgtcacatctgactgacatacttcat
cattgtggccaactggagtcacacaggctggagtttggtcacaatctacgggagtacctg
ctgttggattacgcgaccagtctcatgtcccactgtagtttgtggcaagtgggcgttgac
tacctagaccaatgccatgacactgggagacactaccttgagcagtttattgacaacatg
ccgatcgagactgaaaggaaggcccacaaactcttgaatatctgtgaaaagaggaacatg
cccgaacaaattaaaagcatctgtaaggtgatgggaatgaggtgtttgaaaaaccagaga
ctcggtgctgctctgtcatggttccttcgctcaaaggatgtggcttttgcaacattgata
gcagaaaaatttttatcagaatacaatgagcatggagagttctccaacttggatttgctc
gacaacctgggttctagtatgctgataagccatcgccttacattccttgcaaaatatcgg
gaataccaccgactgtacgaggaacgggaattgtacgcagctggttccctgcttctttca
ttattgacttcacgattggcgccaagggaattttggatcacattactgaaggatgccatc
acgttgttggaggccaaagagtgtatctatgggaggaaggagacgtttgagttgatgcat
tgtttggaagagctaacaaaggacagacaattcctcgctcctgacaatgagaaagaggac
atctctgacttgagggaaacaatcgacttgctaaatttagccttgacaagaaacttggct
cgatcaattgtcattgaaggagtgattaaacccacctag
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