Mya arenaria (softshell): 128207370
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Entry
128207370 CDS
T09995
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128207370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128207370
03016 Transfer RNA biogenesis [BR:
maea03016
]
128207370
Enzymes [BR:
maea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
128207370
Messenger RNA biogenesis [BR:
maea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
128207370
Transfer RNA biogenesis [BR:
maea03016
]
Prokaryotic type
tRNA degradation factors
128207370
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
KH_1
ANKFN1_ab
S1
T6SS_TssG
Motif
Other DBs
NCBI-GeneID:
128207370
NCBI-ProteinID:
XP_052766208
LinkDB
All DBs
Position
11:complement(8061996..8079684)
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AA seq
768 aa
AA seq
DB search
MAASMRIRTNLGKLGITRLLEGDITILKRHIKNKLNLNTLSTLTVPSGGKESLKFEVGKL
ARFADGSVVVTCGDTSVLVAVTGRTEPTPGATFLPLTVDYRQKAAAAGRIPTNHLRREMG
ASDREILTGRVIDRSLRPKFPDSYYNETQVTCNVMSLDGVNDPDVISINGASAALAASVI
PWQGPVGAVRVGFSSDNKIIINPNRRQQLAGKGSVIVTTDQKENILMLEGEMKMVDYGLF
IEGVTQGASSATSVAQALADITNTFKRPFTATNTMPSQNVIDSIEKVHEDKVFSVLADTS
HDKISRDTALKKARYSTIKDCSDLVENQQMIHDALNVVEKKLIRKQILSSSVRCDGRLLE
DVRTISSSVDVFRPLHGSALFQRGQTQVMCTLTFDSLQTALRSDPMSVLTGGIKEKNFML
HYEFPAYATNEIKNPGMKNRREIGHGALAEKGLRAIIPDNLPFSIRLTSEVLESNGSSSM
ASICAGSLALMDAGVHILEPAAGIAMGLVSEISHKRKVYKLLTDIMGLEDYFGDMDLKVG
GTKTGLTAIQMDLKIPGIPVSVLRQAIIQSQAGLAHVLDRMQETSGLSQPRPSFKPNGPV
RELVTVLPAKRAGFLGVGGHNMKKLQHDVGVTITPVDESQYEVFAPNSEAMQEAMEIINK
NLESKKEPELEFNAIYESKIVEIRENGVMVQIHPAMDPVFVPNRQLDHRQVQHASALGLQ
VGQMISVKYFGRDPVSGHHRVSRKVLSALSSKTFQYMDNGTSRKKKKV
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctccatgagaataagaacaaatttaggaaaacttggtattacccgattgctt
gagggtgacattactatattaaaacgccacataaagaataaattaaatctcaatacttta
agcacgttgactgtgccaagtggtggcaaagaaagtctgaaatttgaagtcggcaagctt
gcaagattcgcagatggatctgttgtagtgacgtgtggggatacatctgtgttagtcgct
gtaacaggccggacagagccaacacctggggcaaccttcctgcctctcactgttgattac
cgtcagaaagcggctgctgcaggcagaattccgaccaaccacctacggcgagaaatggga
gcttcagatagggagattctcacagggagagttattgataggtcactacgacccaagttc
ccagattcctattacaatgaaacacaggttacctgcaacgtgatgtcactggatggcgtc
aatgatccagatgtaatcagcatcaatggagcatcagcagccctcgcagcatcggttatc
ccctggcaaggaccagttggtgccgttagggttggctttagtagcgacaacaaaatcatc
attaaccccaatagacgacagcaactggctggcaagggcagcgttatagtcacaactgat
cagaaagagaatatattgatgttggaaggtgagatgaagatggtggactatgggctgttt
atcgagggggtgacacagggtgcctctagcgctacaagtgttgcccaggcccttgccgat
atcacaaatacttttaaacgcccattcacagcaaccaacacaatgccaagccagaatgtc
attgattccatagaaaaggttcatgaagacaaggttttttctgtccttgcagacacaagc
catgacaagatttcaagagacacagctttaaagaaagccagatattcaacaatcaaggac
tgttcagacttagtggagaaccaacagatgattcatgatgccctgaatgtggtggaaaag
aaactcatcagaaaacagatcctcagtagctctgtcaggtgtgatggtcgcctgctggag
gatgttcggacaatatcaagctcggtagatgtgttccggcccctccacggctccgccctc
ttccaacggggccagacccaggtcatgtgtaccctgacctttgactccctccagactgcc
ctaagatcagaccccatgtctgtcctcactggtggcattaaagagaagaatttcatgctg
cattatgagtttccagcctatgcaaccaatgaaatcaagaatcctgggatgaaaaacaga
agggagataggacatggtgctctagcagagaaaggattgcgtgcaataattcctgataac
ttgcccttcagtataaggcttacctctgaggtcttggagtccaatggttcgtcatcgatg
gcgtcaatctgtgcgggctcactagcgctaatggatgcaggggtccacatactggaacca
gctgcagggattgccatggggcttgtgtctgaaatctcacataaaaggaaggtctacaag
ctcctcacagacatcatgggcctggaggactattttggtgacatggatctgaaggttggt
ggcacgaaaactggattgacggctatacagatggacctcaagatcccaggaatcccggtc
agcgttttacgacaggccataatccagagtcaggctggtctagcccatgttctggatcgt
atgcaggagacgtcaggactctctcagccaagaccctcatttaagccgaacggtcctgtg
agagagctagtcacagtccttccagccaagagggctggcttcctcggtgttggaggacac
aatatgaagaaacttcaacatgatgtcggggtgacaatcacgcctgttgatgagagtcag
tacgaggtgttcgcccctaacagtgaggccatgcaggaggccatggaaatcatcaacaaa
aacctggagtcaaaaaaagaacctgagctggaattcaatgctatttatgagtcaaaaata
gttgaaatacgggagaatggtgtgatggttcagattcacccagccatggatcctgtattt
gtgccgaacagacagctggaccatagacaagtacagcatgcgagtgctctgggcctgcag
gttggtcagatgatctcggtaaaatattttgggcgcgaccctgtgtcagggcatcaccgt
gtgtcacgtaaagtcctctctgccctctccagcaaaacctttcagtatatggacaatggc
acgagccgtaagaagaaaaaagtttaa
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