Mya arenaria (softshell): 128207430
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Entry
128207430 CDS
T09995
Name
(RefSeq) serine-arginine protein 55-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
maea
Mya arenaria (softshell)
Pathway
maea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128207430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maea03041
]
128207430
Spliceosome [BR:
maea03041
]
Common components
Common spliceosomal components
SR proteins
128207430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_MARF1
SET_assoc
Transformer
Lig_C
RRM_3
PRP38_assoc
SPOR
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
128207430
NCBI-ProteinID:
XP_052766300
LinkDB
All DBs
Position
11:65344100..65352806
Genome browser
AA seq
283 aa
AA seq
DB search
MSSSGTRVYVGRLPNDARDKDIERFFKGYGRLREILMKNGYTFVEFDDPKDADDAVYELN
GKEMLGERLIIEHARASRGGPRGGGGGFGDRYGGGGGRFGGGGGYGGGYGGGGGRFGGGG
GRDRYGDSGYNSRRPSGGGRYGPPQRTDYRLRVENLSSRASWQDLKDHMRTAGVEVTFAD
AHKQRTGEGVVEFSSESDMLRAIDKMDNTDINGKKIKLVEEGRGGRSSSRRSRSRSRSRS
RSRSRNRSRSRSRSDSRSSRSSRSSTPPKKRSRTKSGDGEGGD
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttccggaacgagagtgtatgttggaagattgccaaatgatgcaagggataaa
gatattgaaaggtttttcaaaggttacggcagattgcgggaaattttgatgaaaaatggc
tacacatttgtggaattcgatgatccaaaagacgctgatgatgctgtgtatgaattaaat
ggaaaagaaatgcttggtgaaagacttatcatagaacatgccagggcctcaaggggaggc
cccaggggtggaggcggtggatttggagacagatacggtggtggaggaggtcggtttggt
ggtggtggtggatatggaggaggatacggcggaggtggtggccggtttggtgggggcggg
ggcagagacaggtacggggactccggatacaacagcaggcgacccagtggtgggggcaga
tatgggccaccccagagaactgactacagactgagagttgaaaacctttcatctagagca
agctggcaggacctgaaggaccacatgaggacggctggtgtggaggttacctttgctgat
gcccacaaacagaggactggtgaaggagtggttgagttctcatccgagtcggatatgctg
cgtgctattgacaagatggacaatacagacatcaacggcaagaagatcaaactggtagag
gaaggacgaggaggtcgaagcagcagcagacgcagccgatccaggtcccgcagccgatcc
aggtcccgctccaggaaccgctccaggtctcgatccaggtctgacagccgaagctccagg
agcagccgatcaagcaccccacccaagaaacgctcccgcacaaagtctggtgatggggag
gggggtgactga
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