Mya arenaria (softshell): 128207530
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Entry
128207530 CDS
T09995
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
maea
Mya arenaria (softshell)
Pathway
maea03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128207530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maea03021
]
128207530
03036 Chromosome and associated proteins [BR:
maea03036
]
128207530
Transcription machinery [BR:
maea03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128207530
Coactivators
SAGA/TFTC/STAGA complex
128207530
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
128207530
STAGA complex
128207530
TFTC complex
128207530
SAGA complex
128207530
SLIK complex
128207530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
128207530
NCBI-ProteinID:
XP_052766449
LinkDB
All DBs
Position
11:complement(53388787..53412901)
Genome browser
AA seq
666 aa
AA seq
DB search
MAEEKRIVTDERRYAIMSRESIKLMADAAGHEETSDSVAGILGEDVSYRLREITQKSAQF
MRHARRKRMNTDDFNKACGFSDIQPVLGHGSQEAVHSFQAVKVEQGEPIHFALDPTLNLA
TEASSTFIPKHSGETTIKAHWLVVEGVQKSTQNPQGTPGNKVEPGGPLMKYFDKITQAVL
GNDEEMMKTALSDLRTNGNISPLLPHFVSFISNGVKTLGDDVCKLTRLLSMVQSLVYNSS
LFLEAQPFLAVMSQSVQYCLLDPLVSSGQSCPTDDHWVLRDYAARVLAHIVGIWGNSVNH
LERYTEKTLREALHDLSRPFACHYGAVMGLMYLGTESVERVLVPHLHVYMPHLLAALEFQ
GLEFVQLQTNAWSVHGAILLCVEHVLQKYIKQFREENITDATNNGEAKKVFKTISDYDTK
FSKRPSFNGFLSAFHKSPVSFYFEMFEYFGDALTLRLPEIAELKSHVFKPKERDLVTSIS
DPTADKSGEELLSELEEEVKREELMKKKQVKTETVHLLDRHQRDRERRAAGVRQQLKQRA
AQQQKLDKFTPASDTDIEVIDVEGVDKLDFRGRSSLAISSACDAPGQGIKMTFAKRAKFT
PDSAFSESLYFTEIKERDRNEENPGRKRKHNSPSPDVDFSQFLGGGIYPSSSFDSVKQRR
RDPSFE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaaaagcgaatagtaacagatgagcgcaggtatgccatcatgagcagggaa
tccatcaagctgatggctgacgctgccggtcacgaggaaaccagtgactcagtggctgga
attctgggagaggatgttagctacaggctcagggaaatcacacagaaaagtgcacagttt
atgaggcatgcaaggcgaaaacgaatgaacactgacgacttcaacaaggcttgtgggttc
agtgatatacagcctgtgctaggacacggatcacaggaggcggtacacagctttcaggca
gttaaggtagagcaaggggaaccgatccactttgctcttgaccccactctcaacctggca
acagaggcatccagtacttttatacccaaacacagcggggaaacaactataaaagctcat
tggctggttgtagaaggggtccagaaatccacacagaatccgcaaggaactccaggcaat
aaggtggagccgggaggtcccctgatgaaatactttgacaagatcacacaggcagtgctg
ggaaatgatgaggaaatgatgaagactgccttgtcagacttgagaacgaacgggaatatc
tcgccacttctgcctcattttgtcagctttattagcaatggggtaaagactctcggagat
gatgtctgtaagctgaccaggctgttatccatggtgcagagtcttgtgtacaatagctca
ctcttcctggaggcacagccttttttggcggtgatgagccagagtgtccagtactgcttg
ttggacccgcttgttagtagtggacagtcctgccccacggatgaccactgggtattgagg
gactatgccgccagggtgctcgctcatattgtcgggatctggggcaacagtgttaaccac
ctagagcgttacacagagaagactctacgagaggctctacatgacctgtcacgacctttt
gcctgccactatggggctgttatggggctcatgtacttggggactgagagtgtggagcga
gtgttggtcccccacctgcatgtgtacatgcctcatctgttggccgccctcgagttccag
ggtctggagtttgtccagctgcagactaacgcttggagtgtgcatggagctatactgctt
tgtgtggagcatgttttacaaaagtatatcaaacagtttcgggaagaaaacatcaccgat
gccacaaataacggcgaggcaaaaaaagtgtttaagaccatttctgattacgacaccaaa
ttctcaaaacgaccttcattcaatggattcctgtcagctttccacaagtcacctgtgtcg
ttctactttgaaatgtttgaatacttcggagatgccttaacgttgaggctacctgaaata
gccgaactgaagtctcatgtgtttaagccaaaagagcgtgacttggtgacgtcaatttcg
gatccgactgcggataaatcgggggaagaactcctcagtgagttggaagaggaagtcaag
cgtgaggagcttatgaagaaaaaacaggttaagacggagaccgtccaccttctcgaccga
catcaaagagatcgagagcgacgtgcagcaggtgttcgacaacagctcaaacaaagagct
gcacagcaacaaaaactggataagttcacaccagccagcgacacagacatcgaggttata
gatgtcgagggtgtggataagttggatttcagaggcagatcatctctggcaatctcgagt
gcttgtgatgccccagggcaggggataaaaatgacttttgccaaacgagctaagtttact
ccagatagtgcttttagtgagtcgttatactttacagaaataaaagagagggacagaaat
gaggaaaacccgggtcgaaaacggaaacataattcaccgagcccggatgtggatttttca
cagtttcttggtggaggtatttatccttcatcaagctttgatagtgtaaaacaaaggaga
agagatccatcatttgaatga
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