| Entry |
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| Name |
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
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| KO |
| K08268 | hypoxia-inducible factor 1 alpha |
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| Organism |
maea Mya arenaria (softshell)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:maea00001]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128207715
04137 Mitophagy - animal
128207715
04148 Efferocytosis
128207715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:maea03000]
128207715
Transcription factors [BR:maea03000]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128207715
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
11:complement(16567872..16627896)
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| AA seq |
779 aa
MAISHKRRNTEKRKEKSRDAARCRRGKEGEIFSELASQLPLPMTTIDSLDKASVMRLLLS
YLKVRSTMEKRPKLEVPLDDPLMLKLDTMYPKALDGILLLLSKEGDMIYISESVSKLLGL
QQIDVMGQSIYDYAHPCDHEEIQEVLSPRSEEEGEGVAKTIFIRLKCTLTSKGRNVNLKS
ASYKVIKLTGRYIADHNVETVCEDDVLMRDPEEEDSEDEVRPFKPHPMPHFLAIAEGIHH
PANIEVPLDRRTFISRHSMNMKFTDCDDRVKRLIGYPSEDLIGQSFFAYHHAIDSKMMDK
AFKDLFSKGQISTGQYRFLAKNGGYVWMVTEATVIYNGKTQKPENVVCVHYVLSHVEQHG
RVLASSQLVTSAPVVKQEVSPAHSPITRLPSPHVPSPCMPSPKQEEPANRPTCAAQSTTR
VQQRVPRRDVKVADLFHLPKFSTEAVFAKKTDEMEEDFFPLDTKKHVGRNGLLDLTRHVQ
RDRDGCIPHDRPTPTAKTGLSQLSPYSERMRDPKKDPHLAPFIRRERSPCTSSGFTSPDR
RSPEQTMSGVPSPPGYLTTINPKDISAMDNLFTTLDTVDHDQDIDFEMRAPYIPMAAEED
HILIEPPSDTYLNMGTDFNPGIFGCTESVFSLKDDIYEGVGPEKRSMSTRDMIGDSTVKK
SIERPQDQMTMKMKRPLDRSCLEKGPPAPKILKYQPAFHISPNPVMRPRRDSSVLMNLLL
RGEDAVHGYIVPNKQNISQSKGRHNGQLTSHDIEVNAPSNTRGLLYGMDLVNALNMARK |
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| NT seq |
2340 nt +upstreamnt +downstreamnt
atggcaatatcacacaaacgaagaaatacggagaaaaggaaggagaaatcgcgggatgcc
gccaggtgtcgccgtggaaaggagggcgagatattttcagaactagcgagtcagttgcca
ctaccaatgacaaccattgactcgctggacaaggcctccgtgatgcgactactgctgagc
taccttaaggttcgaagcacgatggaaaaacgtccaaaactggaggtgcccttggatgac
ccgctaatgttaaagctggacacgatgtacccaaaggccctggatgggatcctgctcttg
ctctccaaggaaggcgacatgatatacatctctgagtccgtctccaagctcctgggacta
cagcagattgatgtgatgggtcagagcatctacgattatgcccatccatgtgaccatgag
gagatacaggaagtactctcccctcgctctgaggaggagggggaaggtgtggctaaaacc
atcttcatacgtctcaagtgtaccctcaccagcaagggacgcaatgtcaacctcaagtct
gcctcgtacaaggtgatcaaattgacgggacgttacattgcggaccacaatgtggagaca
gtgtgtgaggacgatgtgttgatgcgcgaccctgaggaagaggacagtgaggatgaggtc
cgccccttcaaaccacacccaatgccccactttctggccatcgccgagggcatccaccat
ccggccaacattgaggtcccgctggacaggcggactttcatttcacgtcatagcatgaac
atgaagttcactgactgcgacgacagggtaaagcgtttgattggctacccatcagaagat
ttgattggccagtcattcttcgcttaccaccacgccatcgacagcaaaatgatggacaag
gcttttaaagatttgttttcaaagggccagataagcaccggtcagtatcggttcctggca
aagaatggaggatacgtttggatggttaccgaagcaacagttatatacaacggcaagaca
cagaagccagaaaatgtcgtctgtgttcactacgtcctcagtcatgtggagcagcatgga
cgtgtgctggcatcaagccaactagtgacgtctgctccagtggtgaagcaggaagtgtca
cctgcccactctcccatcacacgcctcccgagcccccacgtaccaagcccctgcatgccc
agccctaaacaggaggagcctgccaataggcccacctgtgcagcccagtccaccactcgt
gtccaacagagagtgccaaggcgtgatgtaaaggttgccgatcttttccaccttccaaag
ttcagcacggaggcggtgtttgcaaagaagacagatgaaatggaggaagacttctttccc
ctagacacaaaaaaacatgtgggccgtaacgggctgctggacctgacccgtcatgtccag
cgggatagagatggttgcatcccccatgacaggcctaccccgacagctaaaacaggactg
tcccagctgagcccatacagtgagcggatgagggaccccaagaaggacccacatctggcc
ccattcatcaggcgggaacgaagcccctgcacaagctccggctttacaagcccagaccgt
cgctctcccgaacagacaatgagtggagtcccgagcccgcctggctatctgaccacaatc
aacccaaaggacatcagcgccatggataacctgttcacaacgcttgacaccgttgatcat
gatcaggacatagactttgagatgcgagctccatacatcccaatggcggctgaggaggac
cacatcctgattgagccgcccagtgacacctacctgaacatgggcacagacttcaaccct
gggatatttggttgcacggagagcgtgttcagcctgaaggatgacatctatgagggggta
gggccagagaagcggtcaatgtccacccgtgacatgataggggacagtacagtgaagaag
agcattgagcggccccaggaccagatgacgatgaagatgaagcggcccctggaccggagc
tgcctagaaaaggggcctcctgcacccaaaatcctcaagtatcagcctgctttccacatt
tctcccaatccagtgatgaggccgaggagagacagcagtgtactgatgaacctcctactg
cgaggggaggatgccgttcatggatacatcgtacctaacaaacagaacatatcacagtca
aaaggcaggcataatggtcagttgacgagccatgacattgaggtgaatgctccaagcaac
acgcgaggtctgctctacgggatggacctcgtaaacgcgctcaatatggcccgcaagtga |
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