Mya arenaria (softshell): 128208251
Help
Entry
128208251 CDS
T09995
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
maea
Mya arenaria (softshell)
Pathway
maea03008
Ribosome biogenesis in eukaryotes
maea03013
Nucleocytoplasmic transport
maea03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128208251
03015 mRNA surveillance pathway
128208251
03008 Ribosome biogenesis in eukaryotes
128208251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128208251
03009 Ribosome biogenesis [BR:
maea03009
]
128208251
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128208251
mRNA cycle factors
Stress granule specific factors
128208251
Ribosome biogenesis [BR:
maea03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
128208251
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
LRR_4
RRM_NXF1-2
NTF2
LRR_NXF2
LRR_8
Colicin_D
Motif
Other DBs
NCBI-GeneID:
128208251
NCBI-ProteinID:
XP_052767696
LinkDB
All DBs
Position
11:35611054..35627692
Genome browser
AA seq
662 aa
AA seq
DB search
MAEFRVTTDRDGSRSFNDHDDRWTRGGGSGRYRGRGGNFNRRPRRGGGYGYGGSSYNRGR
GGYSGGRGRGGDRDGPGPRSRLDDDGDETMGNSETKDIARYNPYGRSSRGNFRGNSKYRS
DNRNRPTQIGGDAGIFKRLGLPLDRKTMGDSDWYKVTIPWGKKTEKDFILKSINDHIDVP
FVPTYFHYEDKNAVFYVNDSRAAEGLKSTTKRVTMPNGYKMTILVKPSQPPNIPMGKEEI
DKLKVCMSNRYDPATKALNLSCLHTDQELAQSNLFMCLARPQVMSNVVKVIKENIPELVQ
LDVSNNKLQSLEHLGGLVPSTPDMKVLNLANNKINMLEELRKVQKWKIDWLTLDGNPLCD
KFNDHTAYVSGVRRLFPKVLKLDTTDLPPPITFDIEARTDLPKSKDSYFPNDTVKNGVVK
FLKDYFLVYDSDDRTGLAGAYHETAMFSLSTSYNPTVQNKQTSLSTYIDETRNLLRVYKD
TSRKFKTLKNGNKIVAQLCLLPKTQHDPNSFVVDCNFATAQMISFNIQGVFKEVDKKSDK
PPMRAFSRTFVTVASGSGMVIVNDVLTVTNASPDQIQTAFKNPAPTPSSSPIPQTSPTEP
FAAAGLTEIQTQMVASFMNDSRMNSEWSAKCLVQNNWEYAKAGQNFLELQQKGLIPPEAF
KT
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggccgagttcagggtgacaacagatcgagatggttcgcgatcttttaacgaccatgat
gacagatggacccgcggaggtggatctgggaggtatcgcgggcgaggtggaaactttaac
aggaggccaagacgaggtggtggatatggttacggagggtcaagttataaccggggtcgt
ggaggttacagtgggggtcgtggacgtggaggggacagagatggaccagggccgcgaagc
cggctggatgatgatggagatgaaacaatgggcaacagtgagaccaaggacattgccaga
tacaatccatatggaagatcatctagaggcaacttcagaggcaatagcaaatacagaagt
gacaacagaaataggcctacacaaataggtggcgatgcgggcatattcaagagactgggg
ttgccactagataggaaaacgatgggtgattcggattggtacaaagtcacaattccttgg
ggaaagaaaactgagaaggattttattctcaagagcatcaatgatcatatagatgtgccg
tttgttccaacatattttcactatgaggataagaatgcagtgttctacgtgaatgacagc
cgggctgcagagggattaaagtcaactacaaagagagtcactatgccaaatggctacaag
atgacaattttagtcaagcccagtcaaccacctaacattccgatgggaaaagaagagatt
gataaactgaaggtgtgtatgagtaaccgctacgacccggccacaaaggcgttaaacctg
agttgtctccatacggaccaagagttggcacagagcaacctgttcatgtgccttgcccga
ccacaggtcatgtccaatgtggtgaaagtcatcaaagaaaacattcccgagttggtacag
ctagatgtgagcaacaacaagctccagagtctggagcacctgggcggtcttgtccctagc
acgcccgacatgaaagtgcttaacctggctaacaacaagataaacatgttggaggagtta
cgtaaagtacagaagtggaagatagactggttgactctggacggcaatcctctctgtgat
aagttcaatgatcacactgcgtatgtcagtggtgttaggcgactatttcctaaagtttta
aaattggacacaactgatcttcccccacccatcacgtttgacattgaagcaagaacggac
ctgcccaagtctaaggacagttactttccaaatgacacagtcaaaaatggtgtagtgaag
ttcctaaaagattatttcctggtctacgactctgatgatcgaacaggattggcgggagcg
taccatgagacagccatgttttcactgtccacatcttataacccaactgttcaaaacaaa
cagacgtcattgtcaacctatattgatgaaacaaggaatttgctcagagtctacaaagat
acatcacggaaattcaagacattaaagaacggcaacaagattgtggctcagctctgcctg
ttaccaaagacacaacatgatccaaactccttcgtcgtagactgcaacttcgcaacggct
cagatgatcagtttcaacatacagggagtttttaaagaagtggacaagaagtctgacaag
ccgccgatgagagccttcagcagaacatttgtaacagttgctagtggaagcggcatggtt
atagtcaatgatgtcttgacagtgaccaacgcatctccggaccaaattcagactgccttc
aagaacccggcccccaccccctcctctagccccataccccagacatcgcccacagaacca
tttgcagccgcagggctcaccgagatacagacacagatggttgccagcttcatgaatgac
tccagaatgaactctgagtggtcggcaaaatgtttggtacagaacaactgggagtacgcg
aaagctggtcagaacttcctagagctccagcaaaagggccttataccaccagaagcattc
aaaacgtaa
DBGET
integrated database retrieval system
