Mya arenaria (softshell): 128208296
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Entry
128208296 CDS
T09995
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maea03021
]
128208296
Transcription machinery [BR:
maea03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
128208296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
2Fe-2S_thioredx
RB_B
BRF2-like_C_cyclin_rpt
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
128208296
NCBI-ProteinID:
XP_052767798
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Position
11:complement(40380497..40417778)
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AA seq
742 aa
AA seq
DB search
MSSRMCNQCGCTDIDIDSARGDAVCTGCGSVLEDQIIVSEVQFQENSGGGSSLIGQFVSS
EGGKSFSIGGTFTHGMQKESRTVTLQNGKKKIQHLASQLNLNNHCVDTAFNFYKMAVAKR
MTMGRKSTHVIAACLYLVCRVEKTSHMLLDFSDALQVNVYSLGRTYLHLSRELCINLPDV
DPCLYISRFAHALQFGDKTHEVSMTAMRLVSRMKRDWMSTGRRPSGLCGAALLVSARIHE
FSRTVKEIIKVVKVCQTTLRKRLLEFEETPSSQLTIEEFQTIDLEEEQDPPCFTEGKKRA
KKVALPDMTCEISKLQEEIEETLANQKPRGIWAAYAKMPDDSSSIASEMSSIGDLLDLDT
SCDSGKHSSVDSSPSILKSTSDSDLESKLASQNHTDDSDKICEILKETDRVVSDTNIGST
FKDSELNSKLTDSDLNINDSVTGSKHLDKDTIASEIIMGEGVLNSEERSNVTCDTVGSLG
FLDKVAPLDSGVSEIVSNCMVESNENSCDGMKEDEELDLTGIDDDEIDRLLLTEKEIQLK
TKIWMTENADYLEEQKLKEEKRLKEAEEEAKKPPEKRRKKIQRKKKVPLPEATTPQEAIQ
RIIQEKRISCKINYDVLNDLNVRSASSVKSTVPTGGSILKETKGPVSRLHNTSVTFDLVT
ETPPAKKQRKEELPPILPQMDIKPTDKSTPDVVIESGPVQYEQKDDGYGEEEEDYFEEED
QHLSAAQMLGHTGGEEDYDYDD
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtcgtatgtgtaaccagtgcggttgcactgatattgacattgactcggccaga
ggagatgccgtgtgcacaggatgtgggtcggtgctggaagatcagatcattgtctcggag
gttcagtttcaagaaaattctggtggcggctcttctctcattggccagtttgtctcttca
gaaggaggaaagtccttctcaatcggaggcaccttcactcatggcatgcaaaaggaatca
agaactgtcacgttgcagaatggtaaaaagaaaattcagcaccttgctagccaacttaat
ctgaacaatcactgtgtggacacggcgttcaatttctacaaaatggccgtcgcaaaacgc
atgacgatgggaaggaagtccacacatgttattgctgcgtgcctgtatcttgtgtgccgc
gtagagaaaacatcccacatgcttctcgacttcagtgatgcattacaggtgaatgtgtac
agtcttggcagaacctatctacatctttcccgggagctctgcatcaatctaccggatgtt
gacccatgcctttacatttctcggttcgcccatgccctgcagtttggagacaagacccac
gaggtgtcgatgacagcaatgcgccttgtttcaagaatgaagagggactggatgtccaca
gggagacggcccagtggcctctgtggggcagctctgttggtgtcagccagaatccatgag
ttctccagaactgtcaaagaaatcatcaaggtggtcaaagtctgtcaaaccaccctgaga
aaaaggttgctggagtttgaggagacaccatctagtcagctgaccattgaggagtttcaa
accattgacctagaggaggagcaggacccaccatgcttcacggaaggcaagaaacgtgct
aaaaaggttgcacttccagacatgacatgtgaaatctccaaactacaggaagaaatcgaa
gagactctggccaatcagaaaccaaggggtatctgggcagcatacgctaaaatgcctgat
gactcttcatccattgcgtcggagatgtcaagcataggtgaccttctggacctcgatacc
tcatgtgattcgggcaaacatagcagtgtagactcatctccttcaatattgaagagtacc
agtgattctgatcttgagtcaaaacttgcatcacaaaatcatacagatgatagtgacaaa
atatgtgaaattttgaaggaaacagatagagttgtcagtgatacaaatataggtagtact
tttaaagattcggaattaaatagtaaattaacagattcagacttaaatataaacgattct
gtgacaggaagcaaacatttagacaaggatactatagctagtgaaataattatgggtgaa
ggggttttaaattctgaagaaaggagtaatgtgacttgtgacacagtaggctcccttgga
tttttggataaagttgctccccttgactcaggagttagtgagattgttagcaattgtatg
gtcgagagtaacgagaactcatgtgacgggatgaaggaggatgaagagctggaccttacg
ggcattgacgatgatgagatcgacagactgttgttgacggaaaaagagattcagttaaag
acaaagatctggatgacggaaaatgcagattaccttgaggaacagaaattgaaagaagaa
aaaaggctgaaggaggctgaagaagaggctaagaaacctccagagaaaagaaggaaaaaa
atccaacgcaaaaagaaagtaccgctaccggaggccaccacacctcaggaagcaatacag
cggattattcaagaaaaaaggatctcgtgtaaaatcaattatgacgtactcaacgatctc
aacgtgcgctccgcgtcatctgttaaatctactgtaccgacaggaggctctatattaaaa
gaaaccaaggggccggtttcaagattgcacaataccagtgtgacctttgatcttgtaact
gagacgccaccagccaagaagcagcgcaaagaagaattacctcctatactacctcagatg
gatataaagcccacagataaatccacaccagatgttgtcattgaatcgggacccgtgcaa
tatgaacagaaagatgatggttacggtgaggaggaggaggactattttgaggaggaagac
caacacctcagtgcagctcagatgctaggacatacaggaggggaagaagactatgactat
gatgactag
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