Mya arenaria (softshell): 128208383
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Entry
128208383 CDS
T09995
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128208383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maea03021
]
128208383
Enzymes [BR:
maea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128208383
Transcription machinery [BR:
maea03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
128208383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
128208383
NCBI-ProteinID:
XP_052768218
LinkDB
All DBs
Position
1:complement(44891750..44918899)
Genome browser
AA seq
1142 aa
AA seq
DB search
MESKPNYKNLTSESYGKPAEKQNPVLQNLVKPHVESFNCFLHEGLTKIVENLDPVEFSLP
NKDKISLKIENVIIASPHVSEKAVCPRTVKVYPIECRGRGVTYKGSLQVQIGYSVNGHVG
PSLTKNLGQVPIMVKSAMCNLAGLSPKELIKRGEEEEEMGGYFIVNGIEKVIRMLVLQRR
NFPMCTVRPTWKSRGALFTEYGVMMRCVANDHSATNLVLHYLSNGSSQLCFYNKNQVYFA
PIVIILKGLVSMPDKYIYDELVKGKEDDSFYKGCIVAMLREALNEKLYTQRDVLEYMGSR
FRVITHGVADWKTDVEVGQHIYRRCICSHLTKDIDKFNLLVHMTRKLFDFAKGRCAVESV
DSPMFQEVLLGGHLYQMLVKAKLEQYLNVLRTVIDRHAKSNKDGAEYYKLTPDSLMRALR
FGPDICKSIEFTMSTGNIDSQHALSLLQMSGLTVVADKLNFMRFVSHFRCIHRGAFFGQM
RTTGVRKLLPEAWGFLCPVHTPDGSPCGLMNHASALCQIQVFTMSPQPVLKALYSLGVCP
LSDPPGPVRECYTVMVDGKMVGYVADDQAETVTQKMRYMKVKNLSKVPSTMEVCLVKRTP
YASQYPGLYLFTTPARMVRPVINLALEQVEMIGTFEQVYMDICINQNEAYEGVTTHQELD
DVSMLSFAGNLTPFSDFNQSPRNMYQCQMGKQTMGVPTHTLQYRNDNKVYKLQTPQTPMV
RPRKYDEYDMDNYPLGTNAVVAVISYTGYDMEDAMVINKASFERGFGHATVYKTEMINLC
KKQTAGRFDKTILTFGCKPDTKPFLEGELDSDGLPHIGAYLTEGCTYYSYINTHNGEQKV
VKYKNNEPAWVEHIKVLGNDTGENMRYKVAIMLRFNRNPIIGDKFASRHGQKGVCSMMYP
VENMPFTESGMTPDIIFNPHGYPSRMTIGMMIESMAGKSAATFAHCYDATPFQFSEDDPA
IDHFGELLVKAGYNYYGTERFYSGVDGREMEANVFMGVVYYQRLRHMVSDKFQVRTTGPV
DPVTQQPVKGRKKHGGVRFGEMERDALISHGTPFLLQDRMFNNSDKTLAPVCTKCGNLIS
VSTEKLSTLDKKERNRSHVCSLCKSTDHIQMISVPHVFKYLLIELAAMNIRVDLNVKEMG
CD
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggaatctaaaccgaattataagaatttgacatcagaaagctatggtaaaccagcagag
aagcaaaatccggttttgcagaatctggtaaagccacatgtagagtcattcaactgcttt
ttacatgagggcctaacaaaaattgtagagaatctagacccagtagaattttccttacca
aacaaggataaaatatcattaaagattgagaatgtgataattgccagtccacatgtcagt
gaaaaggcagtctgcccccgaactgttaaggtgtaccctattgagtgccgagggcgaggg
gtgacatacaaaggatcactgcaggtacagatcggatacagtgtaaatggccatgtgggg
ccttctctcactaagaaccttggtcaagtgcccatcatggttaagagtgcaatgtgcaac
ttggcggggctgtcaccaaaggagcttattaaaaggggagaagaggaggaggaaatggga
ggatatttcatcgtcaacggcattgagaaagtcatcaggatgttagtactgcagaggaga
aactttccaatgtgcacagtgagacccacttggaaatcccgaggagcattgttcacggag
tatggtgttatgatgagatgtgtcgcgaatgaccactctgcaacaaatctagtgctacac
tacctaagtaacgggtcatcccagctctgcttctacaacaaaaaccaggtctactttgct
cccatagtcatcattctcaagggtctggtatcgatgcctgacaagtacatttatgatgag
ctggtcaaggggaaagaggatgactctttctacaaaggctgtattgtggccatgctccgt
gaagctttgaatgagaaactatacacacaacgagatgtcctggagtacatggggtctcga
ttccgtgtaatcacacatggagttgctgactggaagactgacgtggaagtcggacaacac
atttacaggagatgcatatgttcccatctcacgaaagacattgacaagttcaatctacta
gtgcacatgactcgtaagctgtttgactttgcgaagggtcggtgtgcagtagagtcagta
gacagccccatgtttcaagaagtgctacttggtggccatctttaccagatgttggtcaag
gccaaactggagcagtatttaaacgtgctgcgaacagtgatagacagacatgccaagtca
aacaaggacggggcggaatactacaaacttacgcccgattccctcatgcgagctctaagg
tttggcccagatatctgcaagtcgatagagttcacaatgtcgacaggcaacatagactcc
cagcatgctctctccctgctacagatgtccggtctaacagttgtagcagacaagctcaac
tttatgcggtttgtctctcacttccgatgtatccacagaggtgctttcttcggccagatg
agaaccacaggtgtgcggaaactgctaccagaggcctggggttttctgtgccctgtacat
accccagacggttccccatgtggactgatgaaccatgcctcagcactttgtcagatccaa
gtattcaccatgtccccccagccagttttgaaggccctctactcccttggagtgtgtccc
ctctctgaccccccagggccggtacgggagtgttacaccgtcatggtagatgggaagatg
gtggggtatgtggctgacgaccaggcagagactgtaacacagaaaatgagatatatgaag
gtcaagaacctcagtaaggttccaagcacgatggaggtgtgtcttgtgaagaggacgccc
tatgccagtcaatacccgggtctgtacctcttcacgacccccgcacgtatggtccgcccc
gtgataaaccttgcgctggagcaggtggagatgatcggcacgttcgaacaagtctatatg
gacatctgcatcaaccagaacgaggcttacgaaggggttacaacacaccaagagctggac
gatgtcagcatgctgtcatttgcaggcaacctgacaccattctctgacttcaaccagagt
ccgcgtaacatgtaccaatgtcagatgggtaagcagaccatgggcgtacctacccacacg
cttcagtaccgaaatgacaacaaggtgtataagctgcagacgcctcagaccccaatggtt
cggcccaggaaatatgatgagtatgacatggataactatccgctagggactaacgctgtg
gtcgctgtcatctcttacactggttatgatatggaagatgccatggtgatcaacaaggca
tcgtttgagcgaggatttggtcatgctactgtgtataagacagaaatgatcaacttgtgt
aaaaaacagacagcaggaagatttgataaaaccatactcacatttggttgcaagccagac
actaagcctttcttggagggggaactggattcagatggccttcctcacattggagcgtat
ttgacagagggatgcacttactatagctatatcaatacgcacaatggtgaacagaaggtt
gtcaagtacaaaaataacgagccagcatgggtagaacacataaaggtcctgggtaacgac
accggggaaaacatgcgctacaaggtcgctatcatgctacgatttaatagaaatcccatc
attggtgacaagtttgcaagcagacatgggcaaaagggtgtttgcagtatgatgtatccg
gttgagaacatgccatttacagagagtggaatgaccccagatattatcttcaatccccat
ggctacccatccagaatgacaataggtatgatgattgaaagtatggcgggaaagtcggct
gccacgtttgcgcattgttatgatgccacaccgttccagttttccgaggacgatcctgct
atcgatcactttggagaactcctcgtaaaagcgggctacaactactacggcacggagcgt
ttctacagtggggtagatggccgagaaatggaggccaatgttttcatgggggttgtatac
taccaaagactgaggcatatggtgtcggacaagttccaggtccgtaccactgggccagtt
gaccctgtgacccagcagccagtgaagggtcgtaagaagcatggcggggtcaggttcggg
gagatggaacgggacgccctcatctctcatggcacacccttcctgctgcaggataggatg
tttaacaactcagacaaaacacttgccccagtctgcacaaagtgcgggaacctcatctcc
gtatctacggagaaactctccaccctggacaagaaggagcgtaaccgcagtcatgtgtgt
tcactatgcaagtcaaccgaccatatacagatgatctcggtgccccatgtgtttaagtat
ctgctgatagagcttgcagcaatgaatattagggtggatttgaatgtgaaagaaatgggt
tgcgattga
DBGET
integrated database retrieval system
